RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 INSM1Q01101 510 aaPredicted RBP17.79■□□□□ 0.44
ITGB1-215ENST00000488494 CAMK2BQ13554 666 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 TCEAL1Q15170 157 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 PTPRRQ15256 657 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 LRRC38Q5VT99 294 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 DENND2CQ68D51 928 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 ALG1LQ6GMV1 187 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 RHOT1Q8IXI2 618 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 CCNYQ8ND76 341 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 TSACCQ96A04 125 aaPredicted RBP17.79■□□□□ 0.44
ITGB1-215ENST00000488494 PDXPQ96GD0 296 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 TBATAQ96M53 351 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 COQ10AQ96MF6 247 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 WDR92Q96MX6 357 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 IL12RB2Q99665 862 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 ANP32EQ9BTT0 268 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 WDR26Q9H7D7 661 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 EVA1BQ9NVM1 165 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 HAUS2Q9NVX0 235 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 RBM22Q9NW64 420 aaKnown RBP eCLIP17.79■□□□□ 0.442e-7■■■■■ 30.7
ITGB1-215ENST00000488494 PHTF1Q9UMS5 762 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 HEY1Q9Y5J3 304 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 PKD1L2Q7Z442 2459 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 SRRM3A6NNA2 597 aaPredicted RBP17.78■□□□□ 0.44
ITGB1-215ENST00000488494 CACNB4O00305 520 aaPredicted RBP17.78■□□□□ 0.44
ITGB1-215ENST00000488494 APOL1O14791 398 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 RASGRP1O95267 797 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 ALPIP09923 528 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 CYP2A6P11509 494 aaPredicted RBP17.78■□□□□ 0.44
ITGB1-215ENST00000488494 TSHRP16473 764 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 COMTP21964 271 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 SLC1A1P43005 524 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 MAGEA1P43355 309 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 HK3P52790 923 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 KIAA1024LP59773 190 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 SRP54P61011 504 aaKnown RBP17.78■□□□□ 0.44
ITGB1-215ENST00000488494 CDKN3Q16667 212 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 ODF2Q5BJF6 829 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 KCTD16Q68DU8 428 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 SLC9A4Q6AI14 798 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 ESRP1Q6NXG1 681 aaKnown RBP17.78■□□□□ 0.44
ITGB1-215ENST00000488494 ENPP7Q6UWV6 458 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 RD3Q7Z3Z2 195 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 TSPAN33Q86UF1 283 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 VSIG1Q86XK7 387 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 PROSER1Q86XN7 944 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 RFX6Q8HWS3 928 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 CCDC13Q8IYE1 715 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 PELI3Q8N2H9 469 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 ATL2Q8NHH9 583 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 FUBP1Q96AE4 644 aaKnown RBP17.78■□□□□ 0.44
ITGB1-215ENST00000488494 MRFAP1L1Q96HT8 127 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 MCCC1Q96RQ3 725 aaPredicted RBP17.78■□□□□ 0.44
ITGB1-215ENST00000488494 LGMNQ99538 433 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 CLPBQ9H078 707 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 GOLPH3Q9H4A6 298 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 USP29Q9HBJ7 922 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 AMACRQ9UHK6 382 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 TFR2Q9UP52 801 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 CHD6Q8TD26 2715 aa17.78■□□□□ 0.44
ITGB1-215ENST00000488494 TRABD2BA6NFA1 517 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 LMO7DNF2Z398 122 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 KCNK1O00180 336 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 TPP1O14773 563 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 LCA5LO95447 670 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 ANXA6P08133 673 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 PDHA1P08559 390 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 ETV3P41162 512 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 NOP2P46087 812 aaKnown RBP17.77■□□□□ 0.44
ITGB1-215ENST00000488494 BLKP51451 505 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 DUSP3P51452 185 aaPredicted RBP17.77■□□□□ 0.44
ITGB1-215ENST00000488494 DYNLT1P63172 113 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 PPIDQ08752 370 aaKnown RBP17.77■□□□□ 0.44
ITGB1-215ENST00000488494 TARDBPQ13148 414 aaKnown RBP eCLIP17.77■□□□□ 0.44
ITGB1-215ENST00000488494 ARHGEF7Q14155 803 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 IHHQ14623 411 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 NR0B2Q15466 257 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 GUSBP11Q6P575 273 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 HSD11B1LQ7Z5J1 315 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 FSTL5Q8N475 847 aaPredicted RBP17.77■□□□□ 0.44
ITGB1-215ENST00000488494 PDCD7Q8N8D1 485 aaKnown RBP17.77■□□□□ 0.44
ITGB1-215ENST00000488494 IFI44Q8TCB0 444 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 PIH1D2Q8WWB5 315 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 RNF25Q96BH1 459 aaPredicted RBP17.77■□□□□ 0.44
ITGB1-215ENST00000488494 DTD2Q96FN9 168 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 SCRN2Q96FV2 425 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 SMIM14Q96QK8 99 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 TDRD1Q9BXT4 1180 aaKnown RBP17.77■□□□□ 0.44
ITGB1-215ENST00000488494 MAK16Q9BXY0 300 aaKnown RBP17.77■□□□□ 0.44
ITGB1-215ENST00000488494 FGF22Q9HCT0 170 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 DDX56Q9NY93 547 aaKnown RBP17.77■□□□□ 0.44
ITGB1-215ENST00000488494 NCKIPSDQ9NZQ3 722 aa17.77■□□□□ 0.44
ITGB1-215ENST00000488494 A0A0U1RQS6 177 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 GOLGA6CA6NDK9 693 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 GOLGA6BA6NDN3 693 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 TAF4O00268 1085 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 FZD6O60353 706 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 GP1BAP07359 652 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 GOLGA6DP0CG33 693 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 CA4P22748 312 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms