RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 SERPINB9P50453 376 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 HK2P52789 917 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 MRPS9P82933 396 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 GALK2Q01415 458 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 TNK2Q07912 1038 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 ILF2Q12905 390 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 SLC10A2Q12908 348 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 PEX6Q13608 980 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 ALCAMQ13740 583 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 CDK10Q15131 360 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 STILQ15468 1287 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 SF1Q15637 639 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 INSCQ1MX18 579 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 CEP55Q53EZ4 464 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 FASTKD1Q53R41 847 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 C1orf220Q5T0J3 134 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 NXNQ6DKJ4 435 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 IQSEC1Q6DN90 963 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 HMBOX1Q6NT76 420 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 ABRAXAS1Q6UWZ7 409 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 TMC5Q6UXY8 1006 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 STXBP4Q6ZWJ1 553 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 MON1BQ7L1V2 547 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 CATSPER3Q86XQ3 398 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 ZNF677Q86XU0 584 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 IGDCC3Q8IVU1 814 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 ANKRD13AQ8IZ07 590 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 SPARTQ8N0X7 666 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 CLIP4Q8N3C7 705 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 AFAP1L2Q8N4X5 818 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 CNTD1Q8N815 330 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 BVESQ8NE79 360 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 GRPEL2Q8TAA5 225 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 FKBP10Q96AY3 582 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 SLCO4A1Q96BD0 722 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 LENG8Q96PV6 779 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 PIGSQ96S52 555 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 CDK5RAP1Q96SZ6 601 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 CDRT15Q96T59 188 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 SENP7Q9BQF6 1050 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 STRA6Q9BX79 667 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 ASPNQ9BXN1 380 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 TMEM117Q9H0C3 514 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 WDR41Q9HAD4 459 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 FANCEQ9HB96 536 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 ANKHQ9HCJ1 492 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 PCDH12Q9NPG4 1184 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 MCM9Q9NXL9 1143 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 STMN3Q9NZ72 180 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 KCND2Q9NZV8 630 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 PI4KBQ9UBF8 816 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 UBA2Q9UBT2 640 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 SARDHQ9UL12 918 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 EMCNQ9ULC0 261 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 CNOT6Q9ULM6 557 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 UGT2A1Q9Y4X1 527 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 PCDHAC2Q9Y5I4 1007 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 ST14Q9Y5Y6 855 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 RAD54BQ9Y620 910 aa4.78□□□□□ -1.64
CDC42BPA-213ENST00000488131 FOCADQ5VW36 1801 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 LOC100653049A0A140TA62 436 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 OR5K3A6NET4 321 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 GOLGA8SH3BPF8 625 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 AP3B1O00203 1094 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 SOCS2O14508 198 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 AURKAO14965 403 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 TMCC2O75069 709 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 GLRA3O75311 464 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 LYPLA1O75608 230 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZMPSTE24O75844 475 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 PIAS1O75925 651 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 KRT34O76011 436 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 VAPBO95292 243 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 TOP3BO95985 862 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 PTTG1O95997 202 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 GNAO1P09471 354 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 HSPA1AP0DMV8 641 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 HSPA1BP0DMV9 641 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CD58P19256 250 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 IL32P24001 234 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CD40LGP29965 261 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 EIF2DP41214 584 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ELK3P41970 407 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ARCN1P48444 511 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 PRKAA2P54646 552 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 MFAP3P55082 362 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 IGBP1P78318 339 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 MPP1Q00013 466 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CNTN2Q02246 1040 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 PPP3CAQ08209 521 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CYP4F3Q08477 520 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 FCHO2Q0JRZ9 810 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 MERTKQ12866 999 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 SLC12A1Q13621 1099 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 TRIM25Q14258 630 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 PCLAFQ15004 111 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CHRNA2Q15822 529 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 PGS1Q32NB8 556 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 TBC1D10BQ4KMP7 808 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 DALRD3Q5D0E6 543 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms