RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 PRSS2P07478 247 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 KRT10P13645 584 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 CD58P19256 250 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 AGAP20933 346 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 CHATP28329 748 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 CDAP32320 146 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 ICAM3P32942 547 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 SHMT1P34896 483 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 ARL3P36405 182 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 RGS2P41220 211 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 RGS19P49795 217 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 HTR6P50406 440 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 ARF3P61204 181 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 OLR1P78380 273 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 ARF1P84077 181 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 SORDQ00796 357 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 SETQ01105 290 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 CRYZQ08257 329 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 DMTNQ08495 405 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 FRG1Q14331 258 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 FGFBP1Q14512 234 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 CCNG2Q16589 344 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 COL28A1Q2UY09 1125 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 FBXO46Q6PJ61 603 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 KLHL24Q6TFL4 600 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 SLC35F3Q8IY50 421 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 ADSSL1Q8N142 457 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 NGEFQ8N5V2 710 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 AADATQ8N5Z0 425 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 ZBTB2Q8N680 514 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 BEST2Q8NFU1 509 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 ADAMTS14Q8WXS8 1223 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 INTS12Q96CB8 462 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 CAMK1GQ96NX5 476 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 TMX4Q9H1E5 349 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 PLEKHA4Q9H4M7 779 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 PLEKHA5Q9HAU0 1116 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 BLOC1S4Q9NUP1 217 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 INTS6Q9UL03 887 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 PCDHA7Q9UN72 937 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 NFE2L3Q9Y4A8 694 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 CAPN7Q9Y6W3 813 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 UTYO14607 1347 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 FHAD1B1AJZ9 1412 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 WDR97A6NE52 1622 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 INSIG1O15503 277 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 TGFB1I1O43294 461 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 HNRNPCL1O60812 293 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 MMP2P08253 660 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 HOXB5P09067 269 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 ACADMP11310 421 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 GPTP24298 496 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 NFKBIAP25963 317 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 PBX3P40426 434 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 MXI1P50539 228 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 Q0VFX4 171 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 PRKG2Q13237 762 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 MAMLD1Q13495 774 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 FHL1Q13642 323 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 EIF4A2Q14240 407 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 ERV3-1Q14264 604 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 DRAP1Q14919 205 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 PLCB4Q15147 1175 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 SHBQ15464 509 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 ALG11Q2TAA5 492 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 DPCR1Q3MIW9 517 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 MMEL1Q495T6 779 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 TDRD12Q587J7 1177 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 SPATA1Q5VX52 437 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 PDILTQ8N807 584 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 Q8N9P0 234 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 ANKRD52Q8NB46 1076 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 HUS1BQ8NHY5 278 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 NEK9Q8TD19 979 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 MIB2Q96AX9 1013 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 FAM149B1Q96BN6 582 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 TMEM204Q9BSN7 226 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 MMTAG2Q9BU76 263 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 SEZ6LQ9BYH1 1024 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 TKTL2Q9H0I9 626 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 DDX4Q9NQI0 724 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 ASAH2Q9NR71 780 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 RCOR1Q9UKL0 485 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 KCNE2Q9Y6J6 123 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 PIAS3Q9Y6X2 628 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 SCAPERQ9BY12 1400 aa3.95□□□□□ -1.78
ECHDC1-217ENST00000488087 DYTNA2CJ06 578 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 LINC01553A4QN01 128 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 TMEM202A6NGA9 273 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 FAM90A8PA6NJQ4 464 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 LACTBL1A8MY62 500 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 J3KR12 359 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 TAF4O00268 1085 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 HSPA12AO43301 675 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 ZIC3O60481 467 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 KCNJ13O60928 360 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 TIPRLO75663 272 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 RNASEH2AO75792 299 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 LETM1O95202 739 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 CH25HO95992 272 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms