RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 USP17L23D6RBM5 183 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 MS4A18H0YCH9 400 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 KIF1CO43896 1103 aaKnown RBP2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 GJB3O75712 270 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 GFPT2O94808 682 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 SOX30O94993 753 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 GAS8-AS1O95177 125 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 SCGB1D1O95968 90 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 CYP1A2P05177 515 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 CYC1P08574 325 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 ACADMP11310 421 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 PCNAP12004 261 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 RARGP13631 454 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 NFKBIAP25963 317 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 CDAP32320 146 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 ARL1P40616 181 aaPredicted RBP2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 EIF2S3P41091 472 aaKnown RBP2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 CLCN3P51790 818 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 F2RL1P55085 397 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 ZP1P60852 638 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 ABATP80404 500 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 EIF4A2Q14240 407 aaKnown RBP2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 TCTN1Q2MV58 587 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 WDR78Q5VTH9 848 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 ZNF549Q6P9A3 640 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 CPLX2Q6PUV4 134 aaKnown RBP2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 C4orf50Q6ZRC1 276 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 IKBIPQ70UQ0 350 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 SFTPA2Q8IWL1 248 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 CCDC105Q8IYK2 499 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 WDTC1Q8N5D0 677 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 FRMD1Q8N878 549 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 HUS1BQ8NHY5 278 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 TMEM163Q8TC26 289 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 ADAMTS14Q8WXS8 1223 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 USP6NLQ92738 828 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 FBXL8Q96CD0 374 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 KCNN2Q9H2S1 579 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 ESRP2Q9H6T0 727 aaKnown RBP2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 FBRSL1Q9HCM7 1045 aaKnown RBP2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 BPIFA1Q9NP55 256 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 SMYD2Q9NRG4 433 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 HAO1Q9UJM8 370 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 NFE2L3Q9Y4A8 694 aa2.95□□□□□ -1.94
R3HDM1-219ENST00000488035 EVPLQ92817 2033 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 BTBD18B2RXH4 712 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 SPRY3O43610 288 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 ZBED4O75132 1171 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 NKX2-2O95096 273 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 FTCDO95954 541 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 EIF2S1P05198 315 aaKnown RBP2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 IRF1P10914 325 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 G6PDP11413 515 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 MYF6P23409 242 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 BDNFP23560 247 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 TBXAS1P24557 533 aaPredicted RBP2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 PSMA4P25789 261 aaKnown RBP2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 ITGB8P26012 769 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 ARRB2P32121 409 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 GARSP41250 739 aaKnown RBP2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 RFX2P48378 723 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 DRG2P55039 364 aaKnown RBP2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 ADORA2A-AS1P86434 159 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 SORDQ00796 357 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 CSTF3Q12996 717 aaKnown RBP2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 EFNB3Q15768 340 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 ASIC2Q16515 512 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 CCNG2Q16589 344 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 MEA1Q16626 185 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 EIF2S3LQ2VIR3 472 aaKnown RBP2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 FNBP1LQ5T0N5 605 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 GFI1BQ5VTD9 330 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 NCAPH2Q6IBW4 605 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 MZT2BQ6NZ67 158 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 NCEH1Q6PIU2 408 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 CCDC129Q6ZRS4 1044 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 MTSS1LQ765P7 747 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 MON1BQ7L1V2 547 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 PATL1Q86TB9 770 aaKnown RBP2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 TTC39CQ8N584 583 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 PDILTQ8N807 584 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 PRR26Q8N8Z3 221 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 OIT3Q8WWZ8 545 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 ZKSCAN4Q969J2 545 aaPredicted RBP2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 MEIS3Q99687 375 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 TMEM204Q9BSN7 226 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 FTOQ9C0B1 505 aaKnown RBP eCLIP2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 GHITMQ9H3K2 345 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 CATSPERBQ9H7T0 1116 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 PRKRIP1Q9H875 184 aaPredicted RBP2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 MKKSQ9NPJ1 570 aaPredicted RBP2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 ASAH2Q9NR71 780 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 DIAPH3Q9NSV4 1193 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 OR6C3Q9NZP0 311 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 SELENONQ9NZV5 590 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 TBC1D29Q9UFV1 150 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 AAR2Q9Y312 384 aaKnown RBP2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 CEPT1Q9Y6K0 416 aa2.94□□□□□ -1.94
R3HDM1-219ENST00000488035 FAM237AA0A1B0GTK4 181 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 A6NCN8 305 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms