RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 TPH1P17752 444 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 PSMA3P25788 255 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 HOXA6P31267 233 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 STX2P32856 288 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 HNF1BP35680 557 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 ELK3P41970 407 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 CHRNA4P43681 627 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 CXCL12P48061 93 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 COPAP53621 1224 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 FAM193AP78312 1265 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 POU6F1Q14863 301 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 CERCAMQ5T4B2 595 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 KIAA1211LQ6NV74 962 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 DPPA4Q7L190 304 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 CROCCP2Q86T23 111 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 CBARPQ8N350 705 aaPredicted RBP11.07□□□□□ -0.64
HDLBP-242ENST00000488013 HDDC3Q8N4P3 179 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 FBXO36Q8NEA4 188 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 FLCNQ8NFG4 579 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 CDKL2Q92772 493 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 FAM131CQ96AQ9 280 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 VOPP1Q96AW1 172 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 MKRN2Q9H000 416 aaKnown RBP11.07□□□□□ -0.64
HDLBP-242ENST00000488013 NEUROG2Q9H2A3 272 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 MTG2Q9H4K7 406 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 SGK2Q9HBY8 427 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 CD248Q9HCU0 757 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 PREBQ9HCU5 417 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 PCDH12Q9NPG4 1184 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 FBXL12Q9NXK8 326 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 BCCIPQ9P287 314 aaKnown RBP eCLIP11.07□□□□□ -0.64
HDLBP-242ENST00000488013 EBF1Q9UH73 591 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 APPL1Q9UKG1 709 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 SARDHQ9UL12 918 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 ZNF711Q9Y462 761 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 RPS6KL1Q9Y6S9 549 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 CHD5Q8TDI0 1954 aa11.07□□□□□ -0.64
HDLBP-242ENST00000488013 C5orf42Q9H799 3197 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 CCDC163A0A0D9SF12 145 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 C1orf232A0A0U1RR37 186 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 TMEM221A6NGB7 291 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 M0R296 226 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 MID1O15344 667 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 RNASEH2AO75792 299 aaKnown RBP11.06□□□□□ -0.64
HDLBP-242ENST00000488013 IGLV3-19P01714 112 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 PYGLP06737 847 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 H2AFXP16104 143 aaPredicted RBP11.06□□□□□ -0.64
HDLBP-242ENST00000488013 AOC1P19801 751 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 NUDT1P36639 197 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 PPARGP37231 505 aaPredicted RBP11.06□□□□□ -0.64
HDLBP-242ENST00000488013 P2RY2P41231 377 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 ABL2P42684 1182 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 MSLNQ13421 630 aaPredicted RBP11.06□□□□□ -0.64
HDLBP-242ENST00000488013 SEPT6Q14141 434 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 NAA30Q147X3 362 aaPredicted RBP11.06□□□□□ -0.64
HDLBP-242ENST00000488013 MAP7D1Q3KQU3 841 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 TMEM52BQ4KMG9 183 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 ANKRD20A4Q4UJ75 823 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 TSTD2Q5T7W7 516 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 STEAP4Q687X5 459 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 DENND2CQ68D51 928 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 Q6ZS52 159 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 C3orf62Q6ZUJ4 267 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 PARS2Q7L3T8 475 aaKnown RBP11.06□□□□□ -0.64
HDLBP-242ENST00000488013 NRSN1Q8IZ57 195 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.06□□□□□ -0.64
HDLBP-242ENST00000488013 GSDMBQ8TAX9 411 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 CALML6Q8TD86 181 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 PBXIP1Q96AQ6 731 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 SGSM3Q96HU1 749 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 NSMCE3Q96MG7 304 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 NECAB3Q96P71 396 aaPredicted RBP11.06□□□□□ -0.64
HDLBP-242ENST00000488013 TTC1Q99614 292 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 C1QTNF7Q9BXJ2 289 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 TXLNGYQ9BZA5 131 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 ITM2CQ9NQX7 267 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 SYBUQ9NX95 663 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 NSMCE4AQ9NXX6 385 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 PKD2L2Q9NZM6 624 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 B4GALT6Q9UBX8 382 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 MTF2Q9Y483 593 aaPredicted RBP11.06□□□□□ -0.64
HDLBP-242ENST00000488013 FAM169AQ9Y6X4 670 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 NUP205Q92621 2012 aa11.06□□□□□ -0.64
HDLBP-242ENST00000488013 A0A087WUV0 522 aaPredicted RBP11.05□□□□□ -0.64
HDLBP-242ENST00000488013 LRRC72A6NJI9 287 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 H7C0S8 307 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 LDB2O43679 373 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 IVLP07476 585 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 FAM153BP0C7A2 387 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 ELFN1P0C7U0 828 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 MYBL2P10244 700 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 NDUFV2P19404 249 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 MMP12P39900 470 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 EIF3BP55884 814 aaKnown RBP11.05□□□□□ -0.64
HDLBP-242ENST00000488013 DCDC1P59894 354 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 RPS21P63220 83 aaKnown RBP11.05□□□□□ -0.64
HDLBP-242ENST00000488013 PRAMEP78395 509 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 CREB5Q02930 508 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 ACVR1Q04771 509 aa11.05□□□□□ -0.64
HDLBP-242ENST00000488013 CNTN1Q12860 1018 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms