RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 A0A1B0GVM2 712 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 TCAF2A6NFQ2 919 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 C16orf96A6NNT2 1141 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 MEIS3P2A8K0S8 358 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 DLDP09622 509 aaKnown RBP11.84□□□□□ -0.51
TRA2B-214ENST00000487615 CDH2P19022 906 aaPredicted RBP11.84□□□□□ -0.51
TRA2B-214ENST00000487615 PRDX6P30041 224 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 ADSLP30566 484 aaPredicted RBP11.84□□□□□ -0.51
TRA2B-214ENST00000487615 CDH4P55283 916 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 LPIN1Q14693 890 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 CYS1Q717R9 158 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 ADAMTSL2Q86TH1 951 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 ZNF786Q8N393 782 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 DNAJC1Q96KC8 554 aaKnown RBP11.84□□□□□ -0.51
TRA2B-214ENST00000487615 GEMIN8Q9NWZ8 242 aaKnown RBP11.84□□□□□ -0.51
TRA2B-214ENST00000487615 MOCS1Q9NZB8 636 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 CORO1CQ9ULV4 474 aaPredicted RBP11.84□□□□□ -0.51
TRA2B-214ENST00000487615 AP4S1Q9Y587 144 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 C1orf232A0A0U1RR37 186 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 TBC1D4O60343 1298 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 FKTNO75072 461 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 FAM58BPP0C7Q3 252 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 OR56A5P0C7T3 313 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 IRX1P78414 480 aaPredicted RBP11.84□□□□□ -0.51
TRA2B-214ENST00000487615 SLC10A7Q0GE19 358 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 SCAPQ12770 1279 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 BOP1Q14137 746 aaKnown RBP11.84□□□□□ -0.51
TRA2B-214ENST00000487615 ZBTB6Q15916 424 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 ADRM1Q16186 407 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 UBXN11Q5T124 520 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 CNSTQ6PJW8 725 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 TXNDC11Q6PKC3 985 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 USP45Q70EL2 814 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 GPRIN1Q7Z2K8 1008 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 GPR22Q99680 433 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 PIF1Q9H611 641 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 ATP13A3Q9H7F0 1226 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 OXSMQ9NWU1 459 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 BTRCQ9Y297 605 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 SAC3D1A6NKF1 404 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 CCNFP41002 786 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 HALP42357 657 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 PPP3CCP48454 512 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 SNRPD1P62314 119 aaKnown RBP11.84□□□□□ -0.51
TRA2B-214ENST00000487615 DPYSQ14117 519 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 GSTA3Q16772 222 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 ACSBG2Q5FVE4 666 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 FBXL22Q6P050 247 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 CLIC5Q9NZA1 410 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 C6orf203Q9P0P8 240 aaPredicted RBP11.84□□□□□ -0.51
TRA2B-214ENST00000487615 ZMYM5Q9UJ78 669 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 GNPTGQ9UJJ9 305 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 SCML2Q9UQR0 700 aa11.84□□□□□ -0.51
TRA2B-214ENST00000487615 C9IYK1 514 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 NPHS1O60500 1241 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 CHRNGP07510 517 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 PKMP14618 531 aaKnown RBP11.83□□□□□ -0.52
TRA2B-214ENST00000487615 WEE1P30291 646 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 PIK3CGP48736 1102 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 YAF2Q8IY57 180 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 DSELQ8IZU8 1212 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 BRSK1Q8TDC3 778 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 C2orf15Q8WU43 125 aaKnown RBP11.83□□□□□ -0.52
TRA2B-214ENST00000487615 LINGO1Q96FE5 620 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 C8orf48Q96LL4 319 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 NPAS2Q99743 824 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 S100A14Q9HCY8 104 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 MKS1Q9NXB0 559 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 MIOSQ9NXC5 875 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 SLC13A4Q9UKG4 626 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 RAI2Q9Y5P3 530 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.83□□□□□ -0.52
TRA2B-214ENST00000487615 F7P08709 466 aaPredicted RBP11.83□□□□□ -0.52
TRA2B-214ENST00000487615 IL4RP24394 825 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 POLR2LP62875 67 aaKnown RBP11.83□□□□□ -0.52
TRA2B-214ENST00000487615 CYP51A1Q16850 503 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 MORN1Q5T089 497 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 GPRIN3Q6ZVF9 776 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 METTL3Q86U44 580 aaKnown RBP11.83□□□□□ -0.52
TRA2B-214ENST00000487615 RAB42Q8N4Z0 105 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 CDYL2Q8N8U2 506 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 DEFB118Q96PH6 123 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 TMEM79Q9BSE2 394 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 ZFP37Q9Y6Q3 630 aaPredicted RBP11.83□□□□□ -0.52
TRA2B-214ENST00000487615 COL11A2P13942 1736 aaPredicted RBP11.83□□□□□ -0.52
TRA2B-214ENST00000487615 AHSGP02765 367 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 ALDOAP04075 364 aaKnown RBP11.83□□□□□ -0.52
TRA2B-214ENST00000487615 CTPS1P17812 591 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 CRY1Q16526 586 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 TAZQ16635 292 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 MBLAC2Q68D91 279 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 CCDC149Q6ZUS6 474 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 CNTD1Q8N815 330 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 FBXO22Q8NEZ5 403 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 B3GALT6Q96L58 329 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 SEPHS2Q99611 448 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 PAAF1Q9BRP4 392 aa11.83□□□□□ -0.52
TRA2B-214ENST00000487615 TRAV19A0A0A6YYK7 116 aa11.82□□□□□ -0.52
TRA2B-214ENST00000487615 SLC38A8A6NNN8 435 aa11.82□□□□□ -0.52
TRA2B-214ENST00000487615 MYO1GB0I1T2 1018 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms