RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 ZNF564Q8TBZ8 553 aaPredicted RBP23.67■■□□□ 1.38
PLOD3-215ENST00000487563 FUBP1Q96AE4 644 aaKnown RBP23.67■■□□□ 1.38
PLOD3-215ENST00000487563 GRAMD1AQ96CP6 724 aa23.67■■□□□ 1.38
PLOD3-215ENST00000487563 NSMCE3Q96MG7 304 aa23.67■■□□□ 1.38
PLOD3-215ENST00000487563 MGME1Q9BQP7 344 aa23.67■■□□□ 1.38
PLOD3-215ENST00000487563 WDR26Q9H7D7 661 aa23.67■■□□□ 1.38
PLOD3-215ENST00000487563 RCOR3Q9P2K3 495 aaPredicted RBP23.67■■□□□ 1.38
PLOD3-215ENST00000487563 MOSPD1Q9UJG1 213 aa23.67■■□□□ 1.38
PLOD3-215ENST00000487563 ASXL3Q9C0F0 2248 aa23.66■■□□□ 1.38
PLOD3-215ENST00000487563 PEX11BO96011 259 aa23.66■■□□□ 1.38
PLOD3-215ENST00000487563 PTMSP20962 102 aa23.66■■□□□ 1.38
PLOD3-215ENST00000487563 VIPR1P32241 457 aa23.66■■□□□ 1.38
PLOD3-215ENST00000487563 MAXP61244 160 aa23.66■■□□□ 1.38
PLOD3-215ENST00000487563 DENND2CQ68D51 928 aa23.66■■□□□ 1.38
PLOD3-215ENST00000487563 PGBD5Q8N414 524 aa23.66■■□□□ 1.38
PLOD3-215ENST00000487563 ZNF248Q8NDW4 579 aa23.66■■□□□ 1.38
PLOD3-215ENST00000487563 OR1E3Q8WZA6 343 aa23.66■■□□□ 1.38
PLOD3-215ENST00000487563 NUS1Q96E22 293 aa23.66■■□□□ 1.38
PLOD3-215ENST00000487563 ATXN7L3BQ96GX2 97 aa23.66■■□□□ 1.38
PLOD3-215ENST00000487563 NOD2Q9HC29 1040 aa23.66■■□□□ 1.38
PLOD3-215ENST00000487563 SATB2Q9UPW6 733 aa23.66■■□□□ 1.38
PLOD3-215ENST00000487563 DGKBQ9Y6T7 804 aa23.66■■□□□ 1.38
PLOD3-215ENST00000487563 LRP4O75096 1905 aa23.65■■□□□ 1.38
PLOD3-215ENST00000487563 EIF4E1BA6NMX2 242 aaKnown RBP23.65■■□□□ 1.38
PLOD3-215ENST00000487563 HTRA2O43464 458 aaPredicted RBP23.65■■□□□ 1.38
PLOD3-215ENST00000487563 CYP2A6P11509 494 aaPredicted RBP23.65■■□□□ 1.38
PLOD3-215ENST00000487563 CR2P20023 1033 aa23.65■■□□□ 1.38
PLOD3-215ENST00000487563 CASP14P31944 242 aa23.65■■□□□ 1.38
PLOD3-215ENST00000487563 MMRN1Q13201 1228 aa23.65■■□□□ 1.38
PLOD3-215ENST00000487563 SOWAHCQ53LP3 525 aaPredicted RBP23.65■■□□□ 1.38
PLOD3-215ENST00000487563 RALGPS1Q5JS13 557 aa23.65■■□□□ 1.38
PLOD3-215ENST00000487563 NYAP1Q6ZVC0 841 aa23.65■■□□□ 1.38
PLOD3-215ENST00000487563 NAF1Q96HR8 494 aaKnown RBP23.65■■□□□ 1.38
PLOD3-215ENST00000487563 RBM15Q96T37 977 aaKnown RBP eCLIP23.65■■□□□ 1.38
PLOD3-215ENST00000487563 FGF22Q9HCT0 170 aa23.65■■□□□ 1.38
PLOD3-215ENST00000487563 THSD1Q9NS62 852 aa23.65■■□□□ 1.38
PLOD3-215ENST00000487563 CTTNBP2NLQ9P2B4 639 aa23.65■■□□□ 1.38
PLOD3-215ENST00000487563 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.65■■□□□ 1.382e-6■■□□□ 13.1
PLOD3-215ENST00000487563 TMEM202A6NGA9 273 aa23.64■■□□□ 1.37
PLOD3-215ENST00000487563 PDE2AO00408 941 aaPredicted RBP23.64■■□□□ 1.37
PLOD3-215ENST00000487563 DXOO77932 396 aaKnown RBP23.64■■□□□ 1.37
PLOD3-215ENST00000487563 RBMS1P29558 406 aaKnown RBP23.64■■□□□ 1.37
PLOD3-215ENST00000487563 TRAF2Q12933 501 aa23.64■■□□□ 1.37
PLOD3-215ENST00000487563 COL9A2Q14055 689 aaPredicted RBP23.64■■□□□ 1.37
PLOD3-215ENST00000487563 CNGA3Q16281 694 aa23.64■■□□□ 1.37
PLOD3-215ENST00000487563 TAF8Q7Z7C8 310 aa23.64■■□□□ 1.37
PLOD3-215ENST00000487563 LRRC49Q8IUZ0 686 aa23.64■■□□□ 1.37
PLOD3-215ENST00000487563 SPOCK2Q92563 424 aa23.64■■□□□ 1.37
PLOD3-215ENST00000487563 CCDC74AQ96AQ1 378 aa23.64■■□□□ 1.37
PLOD3-215ENST00000487563 NT5MQ9NPB1 228 aa23.64■■□□□ 1.37
PLOD3-215ENST00000487563 MRPL40Q9NQ50 206 aaKnown RBP23.64■■□□□ 1.37
PLOD3-215ENST00000487563 KCTD5Q9NXV2 234 aa23.64■■□□□ 1.37
PLOD3-215ENST00000487563 PHTF1Q9UMS5 762 aa23.64■■□□□ 1.37
PLOD3-215ENST00000487563 ENTPD2Q9Y5L3 495 aa23.64■■□□□ 1.37
PLOD3-215ENST00000487563 SHROOM3Q8TF72 1996 aa23.63■■□□□ 1.37
PLOD3-215ENST00000487563 MFSD11O43934 449 aa23.63■■□□□ 1.37
PLOD3-215ENST00000487563 HEXIM1O94992 359 aaKnown RBP23.63■■□□□ 1.37
PLOD3-215ENST00000487563 CD48P09326 243 aa23.63■■□□□ 1.37
PLOD3-215ENST00000487563 GM2AP17900 193 aa23.63■■□□□ 1.37
PLOD3-215ENST00000487563 ERVPABLB-1P60509 514 aa23.63■■□□□ 1.37
PLOD3-215ENST00000487563 ITKQ08881 620 aa23.63■■□□□ 1.37
PLOD3-215ENST00000487563 ARHGEF7Q14155 803 aa23.63■■□□□ 1.37
PLOD3-215ENST00000487563 ZSCAN23Q3MJ62 389 aa23.63■■□□□ 1.37
PLOD3-215ENST00000487563 ARMC12Q5T9G4 340 aa23.63■■□□□ 1.37
PLOD3-215ENST00000487563 KCTD16Q68DU8 428 aa23.63■■□□□ 1.37
PLOD3-215ENST00000487563 PNCKQ6P2M8 343 aa23.63■■□□□ 1.37
PLOD3-215ENST00000487563 FOXR1Q6PIV2 292 aa23.63■■□□□ 1.37
PLOD3-215ENST00000487563 USP45Q70EL2 814 aa23.63■■□□□ 1.37
PLOD3-215ENST00000487563 SPACA3Q8IXA5 215 aa23.63■■□□□ 1.37
PLOD3-215ENST00000487563 CTNNBL1Q8WYA6 563 aaPredicted RBP23.63■■□□□ 1.37
PLOD3-215ENST00000487563 COQ10AQ96MF6 247 aa23.63■■□□□ 1.37
PLOD3-215ENST00000487563 FCRL3Q96P31 734 aaPredicted RBP23.63■■□□□ 1.37
PLOD3-215ENST00000487563 XPO4Q9C0E2 1151 aaKnown RBP23.63■■□□□ 1.37
PLOD3-215ENST00000487563 CYP4F12Q9HCS2 524 aa23.63■■□□□ 1.37
PLOD3-215ENST00000487563 RP1P56715 2156 aa23.62■■□□□ 1.37
PLOD3-215ENST00000487563 GOLGA6CA6NDK9 693 aa23.62■■□□□ 1.37
PLOD3-215ENST00000487563 GOLGA6BA6NDN3 693 aa23.62■■□□□ 1.37
PLOD3-215ENST00000487563 TNFRSF10CO14798 259 aa23.62■■□□□ 1.37
PLOD3-215ENST00000487563 HOXC4P09017 264 aaPredicted RBP23.62■■□□□ 1.37
PLOD3-215ENST00000487563 GOLGA6DP0CG33 693 aa23.62■■□□□ 1.37
PLOD3-215ENST00000487563 KRT10P13645 584 aa23.62■■□□□ 1.37
PLOD3-215ENST00000487563 TRIM23P36406 574 aa23.62■■□□□ 1.37
PLOD3-215ENST00000487563 TSR1Q2NL82 804 aaKnown RBP23.62■■□□□ 1.37
PLOD3-215ENST00000487563 ZFYVE27Q5T4F4 411 aa23.62■■□□□ 1.37
PLOD3-215ENST00000487563 KCTD6Q8NC69 237 aa23.62■■□□□ 1.37
PLOD3-215ENST00000487563 FAM46DQ8NEK8 389 aa23.62■■□□□ 1.37
PLOD3-215ENST00000487563 OR6C4Q8NGE1 309 aa23.62■■□□□ 1.37
PLOD3-215ENST00000487563 DEF6Q9H4E7 631 aa23.62■■□□□ 1.37
PLOD3-215ENST00000487563 PRORYQ9H606 182 aa23.62■■□□□ 1.37
PLOD3-215ENST00000487563 SUDS3Q9H7L9 328 aaPredicted RBP23.62■■□□□ 1.37
PLOD3-215ENST00000487563 PHPT1Q9NRX4 125 aaPredicted RBP23.62■■□□□ 1.37
PLOD3-215ENST00000487563 HAUS2Q9NVX0 235 aa23.62■■□□□ 1.37
PLOD3-215ENST00000487563 GOLGA6AQ9NYA3 693 aa23.62■■□□□ 1.37
PLOD3-215ENST00000487563 TTLL3Q9Y4R7 772 aa23.62■■□□□ 1.37
PLOD3-215ENST00000487563 RAI2Q9Y5P3 530 aa23.62■■□□□ 1.37
PLOD3-215ENST00000487563 ATRXP46100 2492 aa23.62■■□□□ 1.37
PLOD3-215ENST00000487563 PROSCO94903 275 aa23.61■■□□□ 1.37
PLOD3-215ENST00000487563 PGLSO95336 258 aa23.61■■□□□ 1.37
PLOD3-215ENST00000487563 H2AFZP0C0S5 128 aa23.61■■□□□ 1.37
PLOD3-215ENST00000487563 MYCLP1P12525 358 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms