RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 PATE1Q8WXA2 126 aa15.41■□□□□ 0.06
MCF2L-228ENST00000487354 ECHDC3Q96DC8 303 aa15.41■□□□□ 0.06
MCF2L-228ENST00000487354 PSMG3-AS1Q96PY0 264 aa15.41■□□□□ 0.06
MCF2L-228ENST00000487354 TAAR9Q96RI9 348 aa15.41■□□□□ 0.06
MCF2L-228ENST00000487354 PDCL3Q9H2J4 239 aa15.41■□□□□ 0.06
MCF2L-228ENST00000487354 DPEP2Q9H4A9 486 aa15.41■□□□□ 0.06
MCF2L-228ENST00000487354 CYP4F12Q9HCS2 524 aa15.41■□□□□ 0.06
MCF2L-228ENST00000487354 B3GALT1Q9Y5Z6 326 aa15.41■□□□□ 0.06
MCF2L-228ENST00000487354 PRSS38A1L453 326 aa15.4■□□□□ 0.06
MCF2L-228ENST00000487354 CFAP69A5D8W1 941 aa15.4■□□□□ 0.06
MCF2L-228ENST00000487354 WASH4PA8MWX3 477 aa15.4■□□□□ 0.06
MCF2L-228ENST00000487354 F8VZ95 297 aa15.4■□□□□ 0.06
MCF2L-228ENST00000487354 GADD45BO75293 160 aaPredicted RBP15.4■□□□□ 0.06
MCF2L-228ENST00000487354 FGF1P05230 155 aa15.4■□□□□ 0.06
MCF2L-228ENST00000487354 THRAP10827 490 aa15.4■□□□□ 0.06
MCF2L-228ENST00000487354 CHRNB2P17787 502 aa15.4■□□□□ 0.06
MCF2L-228ENST00000487354 XPAP23025 273 aaPredicted RBP15.4■□□□□ 0.06
MCF2L-228ENST00000487354 SDC4P31431 198 aa15.4■□□□□ 0.06
MCF2L-228ENST00000487354 MAN2A1Q16706 1144 aa15.4■□□□□ 0.06
MCF2L-228ENST00000487354 AMZ1Q400G9 498 aa15.4■□□□□ 0.06
MCF2L-228ENST00000487354 ERAP2Q6P179 960 aa15.4■□□□□ 0.06
MCF2L-228ENST00000487354 BRAT1Q6PJG6 821 aa15.4■□□□□ 0.06
MCF2L-228ENST00000487354 PIM3Q86V86 326 aa15.4■□□□□ 0.06
MCF2L-228ENST00000487354 UMODL1-AS1Q8N2C9 162 aa15.4■□□□□ 0.06
MCF2L-228ENST00000487354 ZNF641Q96N77 438 aaPredicted RBP15.4■□□□□ 0.06
MCF2L-228ENST00000487354 NCAPGQ9BPX3 1015 aa15.4■□□□□ 0.06
MCF2L-228ENST00000487354 SPRY4Q9C004 299 aa15.4■□□□□ 0.06
MCF2L-228ENST00000487354 CDH19Q9H159 772 aa15.4■□□□□ 0.06
MCF2L-228ENST00000487354 LRRC19Q9H756 370 aa15.4■□□□□ 0.06
MCF2L-228ENST00000487354 TMEM9Q9P0T7 183 aa15.4■□□□□ 0.06
MCF2L-228ENST00000487354 MYO9AB2RTY4 2548 aa15.4■□□□□ 0.06
MCF2L-228ENST00000487354 ZNF106Q9H2Y7 1883 aaKnown RBP15.4■□□□□ 0.06
MCF2L-228ENST00000487354 J3KR12 359 aa15.39■□□□□ 0.05
MCF2L-228ENST00000487354 CACNB4O00305 520 aaPredicted RBP15.39■□□□□ 0.05
MCF2L-228ENST00000487354 DUX1O43812 170 aa15.39■□□□□ 0.05
MCF2L-228ENST00000487354 CCNB1P14635 433 aa15.39■□□□□ 0.05
MCF2L-228ENST00000487354 EPHB2P29323 1055 aa15.39■□□□□ 0.05
MCF2L-228ENST00000487354 MTIF2P46199 727 aaKnown RBP15.39■□□□□ 0.05
MCF2L-228ENST00000487354 ATP1A2P50993 1020 aa15.39■□□□□ 0.05
MCF2L-228ENST00000487354 LIMK2P53671 638 aa15.39■□□□□ 0.05
MCF2L-228ENST00000487354 YBEYP58557 167 aaPredicted RBP15.39■□□□□ 0.05
MCF2L-228ENST00000487354 FMO1Q01740 532 aa15.39■□□□□ 0.05
MCF2L-228ENST00000487354 CLPPQ16740 277 aaPredicted RBP15.39■□□□□ 0.05
MCF2L-228ENST00000487354 PARP15Q460N3 678 aa15.39■□□□□ 0.05
MCF2L-228ENST00000487354 TMEM164Q5U3C3 297 aa15.39■□□□□ 0.05
MCF2L-228ENST00000487354 AFMIDQ63HM1 303 aa15.39■□□□□ 0.05
MCF2L-228ENST00000487354 ZNF354CQ86Y25 554 aa15.39■□□□□ 0.05
MCF2L-228ENST00000487354 BMPERQ8N8U9 685 aa15.39■□□□□ 0.05
MCF2L-228ENST00000487354 C11orf70Q9BRQ4 267 aa15.39■□□□□ 0.05
MCF2L-228ENST00000487354 DDA1Q9BW61 102 aa15.39■□□□□ 0.05
MCF2L-228ENST00000487354 NDST4Q9H3R1 872 aa15.39■□□□□ 0.05
MCF2L-228ENST00000487354 OCIAD1Q9NX40 245 aa15.39■□□□□ 0.05
MCF2L-228ENST00000487354 UBA2Q9UBT2 640 aaPredicted RBP15.39■□□□□ 0.05
MCF2L-228ENST00000487354 SEPT3Q9UH03 358 aa15.39■□□□□ 0.05
MCF2L-228ENST00000487354 NOTCH2Q04721 2471 aa15.38■□□□□ 0.05
MCF2L-228ENST00000487354 ECEL1O95672 775 aa15.38■□□□□ 0.05
MCF2L-228ENST00000487354 CEACAM5P06731 702 aa15.38■□□□□ 0.05
MCF2L-228ENST00000487354 UCHL3P15374 230 aa15.38■□□□□ 0.05
MCF2L-228ENST00000487354 AK4P27144 223 aaPredicted RBP15.38■□□□□ 0.05
MCF2L-228ENST00000487354 ALDH4A1P30038 563 aa15.38■□□□□ 0.05
MCF2L-228ENST00000487354 RFC1P35251 1148 aaPredicted RBP15.38■□□□□ 0.05
MCF2L-228ENST00000487354 STAT1P42224 750 aa15.38■□□□□ 0.05
MCF2L-228ENST00000487354 GSCP56915 257 aaPredicted RBP15.38■□□□□ 0.05
MCF2L-228ENST00000487354 GRM3Q14832 879 aa15.38■□□□□ 0.05
MCF2L-228ENST00000487354 NKAIN2Q5VXU1 208 aa15.38■□□□□ 0.05
MCF2L-228ENST00000487354 DPPA4Q7L190 304 aa15.38■□□□□ 0.05
MCF2L-228ENST00000487354 NAGSQ8N159 534 aa15.38■□□□□ 0.05
MCF2L-228ENST00000487354 MSANTD4Q8NCY6 345 aa15.38■□□□□ 0.05
MCF2L-228ENST00000487354 SLC30A5Q8TAD4 765 aa15.38■□□□□ 0.05
MCF2L-228ENST00000487354 KIAA1524Q8TCG1 905 aa15.38■□□□□ 0.05
MCF2L-228ENST00000487354 ZDHHC1Q8WTX9 485 aa15.38■□□□□ 0.05
MCF2L-228ENST00000487354 ART4Q93070 314 aa15.38■□□□□ 0.05
MCF2L-228ENST00000487354 TUBGCP5Q96RT8 1024 aa15.38■□□□□ 0.05
MCF2L-228ENST00000487354 WDR26Q9H7D7 661 aa15.38■□□□□ 0.05
MCF2L-228ENST00000487354 TAAR2Q9P1P5 351 aa15.38■□□□□ 0.05
MCF2L-228ENST00000487354 ANAPC2Q9UJX6 822 aa15.38■□□□□ 0.05
MCF2L-228ENST00000487354 PLAAQ9Y263 795 aa15.38■□□□□ 0.05
MCF2L-228ENST00000487354 TCRBV5S1A1TA0A578 114 aa15.37■□□□□ 0.05
MCF2L-228ENST00000487354 TRAFD1O14545 582 aaPredicted RBP15.37■□□□□ 0.05
MCF2L-228ENST00000487354 PPM1DO15297 605 aa15.37■□□□□ 0.05
MCF2L-228ENST00000487354 NKX2-8O15522 239 aa15.37■□□□□ 0.05
MCF2L-228ENST00000487354 RAD1O60671 282 aa15.37■□□□□ 0.05
MCF2L-228ENST00000487354 PRAMEF11O60813 436 aa15.37■□□□□ 0.05
MCF2L-228ENST00000487354 ELFN1P0C7U0 828 aa15.37■□□□□ 0.05
MCF2L-228ENST00000487354 MYCLP1P12525 358 aaPredicted RBP15.37■□□□□ 0.05
MCF2L-228ENST00000487354 MPSTP25325 297 aa15.37■□□□□ 0.05
MCF2L-228ENST00000487354 CCR10P46092 362 aa15.37■□□□□ 0.05
MCF2L-228ENST00000487354 SQSTM1Q13501 440 aa15.37■□□□□ 0.05
MCF2L-228ENST00000487354 TRA2AQ13595 282 aaKnown RBP eCLIP15.37■□□□□ 0.05
MCF2L-228ENST00000487354 VWA3BQ502W6 1294 aa15.37■□□□□ 0.05
MCF2L-228ENST00000487354 PNCKQ6P2M8 343 aa15.37■□□□□ 0.05
MCF2L-228ENST00000487354 SLFN11Q7Z7L1 901 aa15.37■□□□□ 0.05
MCF2L-228ENST00000487354 CACNA2D3Q8IZS8 1091 aa15.37■□□□□ 0.05
MCF2L-228ENST00000487354 IL22RA1Q8N6P7 574 aa15.37■□□□□ 0.05
MCF2L-228ENST00000487354 TSEN2Q8NCE0 465 aaKnown RBP15.37■□□□□ 0.05
MCF2L-228ENST00000487354 OR4D9Q8NGE8 314 aa15.37■□□□□ 0.05
MCF2L-228ENST00000487354 SLC45A3Q96JT2 553 aa15.37■□□□□ 0.05
MCF2L-228ENST00000487354 COQ10AQ96MF6 247 aa15.37■□□□□ 0.05
MCF2L-228ENST00000487354 PCDHB18PQ96TA0 734 aa15.37■□□□□ 0.05
MCF2L-228ENST00000487354 FRMD8Q9BZ67 464 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms