RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 RPS6KA3P51812 740 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 MC1RQ01726 317 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 FMO1Q01740 532 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 CDR2Q01850 454 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 CNTN1Q12860 1018 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 SETDB1Q15047 1291 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 SPA17Q15506 151 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 ZNF284Q2VY69 593 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 ZC3H12AQ5D1E8 599 aaKnown RBP8.55□□□□□ -1.04
APTX-228ENST00000486724 PHF19Q5T6S3 580 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 FAM46CQ5VWP2 391 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 NEK5Q6P3R8 708 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 KYAT3Q6YP21 454 aaKnown RBP8.55□□□□□ -1.04
APTX-228ENST00000486724 ZNF662Q6ZS27 426 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 UNC93AQ86WB7 457 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 MFN1Q8IWA4 741 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 ARFGAP2Q8N6H7 521 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 ARL10Q8N8L6 244 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 DRAXINQ8NBI3 349 aaPredicted RBP8.55□□□□□ -1.04
APTX-228ENST00000486724 SLC30A5Q8TAD4 765 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 WFDC5Q8TCV5 224 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 SLC20A1Q8WUM9 679 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 DTNBP1Q96EV8 351 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 EFHD1Q9BUP0 239 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 LRRN3Q9H3W5 708 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 LUC7LQ9NQ29 371 aaKnown RBP8.55□□□□□ -1.04
APTX-228ENST00000486724 MARCH2Q9P0N8 246 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 KLF15Q9UIH9 416 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 ERVW-1Q9UQF0 538 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 KCNMB2Q9Y691 235 aa8.55□□□□□ -1.04
APTX-228ENST00000486724 ANKRD65E5RJM6 399 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 RAD1O60671 282 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 SORBS2O94875 1100 aaKnown RBP8.54□□□□□ -1.04
APTX-228ENST00000486724 LUC7L3O95232 432 aaKnown RBP8.54□□□□□ -1.04
APTX-228ENST00000486724 FESP07332 822 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 MMEP08473 750 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 CCDC130P13994 396 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 CHRNB2P17787 502 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 TNFAIP3P21580 790 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 ARSDP51689 593 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 VAV2P52735 878 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 NDST1P52848 882 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 RAD23BP54727 409 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 NAP1L1P55209 391 aaKnown RBP8.54□□□□□ -1.04
APTX-228ENST00000486724 RIPK1Q13546 671 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 NAA25Q14CX7 972 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 INPP5JQ15735 1006 aaPredicted RBP8.54□□□□□ -1.04
APTX-228ENST00000486724 CRTC2Q53ET0 693 aaPredicted RBP8.54□□□□□ -1.04
APTX-228ENST00000486724 PRRT3Q5FWE3 981 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 ZRANB3Q5FWF4 1079 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 ZNF569Q5MCW4 686 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 MPP7Q5T2T1 576 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 RNF219Q5W0B1 726 aaPredicted RBP8.54□□□□□ -1.04
APTX-228ENST00000486724 TRIM72Q6ZMU5 477 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 CCDC121Q6ZUS5 278 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 SCD5Q86SK9 330 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 HORMAD1Q86X24 394 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 CCNJLQ8IV13 435 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 KYQ8NBH2 561 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 SLC4A11Q8NBS3 891 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 TRIM58Q8NG06 486 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 SLC2A14Q8TDB8 520 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 CCDC114Q96M63 670 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 RUFY1Q96T51 708 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 DNAI2Q9GZS0 605 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 SLC40A1Q9NP59 571 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 PNPLA8Q9NP80 782 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 ACP6Q9NPH0 428 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 HMGXB4Q9UGU5 601 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 APOBEC3BQ9UH17 382 aaKnown RBP8.54□□□□□ -1.04
APTX-228ENST00000486724 IPO11Q9UI26 975 aaKnown RBP8.54□□□□□ -1.04
APTX-228ENST00000486724 STOML2Q9UJZ1 356 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 CORO1CQ9ULV4 474 aaPredicted RBP8.54□□□□□ -1.04
APTX-228ENST00000486724 NAALADL1Q9UQQ1 740 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 PCDHGA3Q9Y5H0 932 aa8.54□□□□□ -1.04
APTX-228ENST00000486724 GOLGA6L10A6NI86 522 aa8.53□□□□□ -1.04
APTX-228ENST00000486724 C1QTNF3-AMACRE9PGA6 284 aa8.53□□□□□ -1.04
APTX-228ENST00000486724 MYO1FO00160 1098 aa8.53□□□□□ -1.04
APTX-228ENST00000486724 YY2O15391 372 aa8.53□□□□□ -1.04
APTX-228ENST00000486724 PJA2O43164 708 aa8.53□□□□□ -1.04
APTX-228ENST00000486724 THAP12O43422 761 aa8.53□□□□□ -1.04
APTX-228ENST00000486724 MED7O43513 233 aa8.53□□□□□ -1.04
APTX-228ENST00000486724 GCATO75600 419 aa8.53□□□□□ -1.04
APTX-228ENST00000486724 RFPL1O75677 317 aa8.53□□□□□ -1.04
APTX-228ENST00000486724 LSM8O95777 96 aaKnown RBP8.53□□□□□ -1.04
APTX-228ENST00000486724 LATS1O95835 1130 aa8.53□□□□□ -1.04
APTX-228ENST00000486724 RHOXF2BP0C7M4 288 aa8.53□□□□□ -1.04
APTX-228ENST00000486724 FAM200BP0CF97 657 aa8.53□□□□□ -1.04
APTX-228ENST00000486724 VDRP11473 427 aa8.53□□□□□ -1.04
APTX-228ENST00000486724 GZMAP12544 262 aa8.53□□□□□ -1.04
APTX-228ENST00000486724 VARSP26640 1264 aaKnown RBP8.53□□□□□ -1.04
APTX-228ENST00000486724 GGCXP38435 758 aa8.53□□□□□ -1.04
APTX-228ENST00000486724 MAGEA8P43361 318 aa8.53□□□□□ -1.04
APTX-228ENST00000486724 RABIFP47224 123 aa8.53□□□□□ -1.04
APTX-228ENST00000486724 SGSHP51688 502 aa8.53□□□□□ -1.04
APTX-228ENST00000486724 CCNHP51946 323 aaPredicted RBP8.53□□□□□ -1.04
APTX-228ENST00000486724 TAS2R38P59533 333 aa8.53□□□□□ -1.04
APTX-228ENST00000486724 ECT2LQ008S8 904 aa8.53□□□□□ -1.04
APTX-228ENST00000486724 PDE1CQ14123 709 aaPredicted RBP8.53□□□□□ -1.04
APTX-228ENST00000486724 C16orf72Q14CZ0 275 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms