RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 INO80DQ53TQ3 878 aaPredicted RBP20.41■□□□□ 0.86
HPS3-206ENST00000486530 GLT6D1Q7Z4J2 308 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 SDCCAG8Q86SQ7 713 aaPredicted RBP20.41■□□□□ 0.86
HPS3-206ENST00000486530 MRPS31Q92665 395 aaKnown RBP20.41■□□□□ 0.86
HPS3-206ENST00000486530 MCUR1Q96AQ8 359 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 TMA16Q96EY4 203 aaKnown RBP20.41■□□□□ 0.86
HPS3-206ENST00000486530 UBXN10Q96LJ8 280 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 ADGRE3Q9BY15 652 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 MMADHCQ9H3L0 296 aaPredicted RBP20.41■□□□□ 0.86
HPS3-206ENST00000486530 RAI2Q9Y5P3 530 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 GBF1Q92538 1859 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 SLCO1B7G3V0H7 640 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 TGM5O43548 720 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 SNAP91O60641 907 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 PIGNO95427 931 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 CD160O95971 181 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 PRLP01236 227 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 CNPP09543 421 aaKnown RBP20.4■□□□□ 0.86
HPS3-206ENST00000486530 CCDC166P0CW27 439 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 CCND1P24385 295 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 PSMA3P25788 255 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 GABRR2P28476 465 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 RPL14P50914 215 aaKnown RBP20.4■□□□□ 0.86
HPS3-206ENST00000486530 PFKPQ01813 784 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 PTPRCAPQ14761 206 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 TYSND1Q2T9J0 566 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 ARL13AQ5H913 290 aaPredicted RBP20.4■□□□□ 0.86
HPS3-206ENST00000486530 FSCBQ5H9T9 825 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 WASHC2DQ5SRD0 308 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 VWA5B1Q5TIE3 1220 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 AFTPHQ6ULP2 937 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 PIWIL4Q7Z3Z4 852 aaKnown RBP20.4■□□□□ 0.86
HPS3-206ENST00000486530 TMPRSS6Q8IU80 811 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 RNF135Q8IUD6 432 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 ARHGAP24Q8N264 748 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 STON2Q8WXE9 905 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 CDKN2AIPNLQ96HQ2 116 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 ZBED2Q9BTP6 218 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 INTS10Q9NVR2 710 aaKnown RBP20.4■□□□□ 0.86
HPS3-206ENST00000486530 NCKIPSDQ9NZQ3 722 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 VPS28Q9UK41 221 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 SPO11Q9Y5K1 396 aa20.4■□□□□ 0.86
HPS3-206ENST00000486530 C2orf81A6NN90 581 aa20.39■□□□□ 0.86
HPS3-206ENST00000486530 MATN2O00339 956 aa20.39■□□□□ 0.86
HPS3-206ENST00000486530 LRG1P02750 347 aa20.39■□□□□ 0.86
HPS3-206ENST00000486530 SPATA31D3P0C874 917 aa20.39■□□□□ 0.86
HPS3-206ENST00000486530 FDXRP22570 491 aa20.39■□□□□ 0.86
HPS3-206ENST00000486530 MPSTP25325 297 aa20.39■□□□□ 0.86
HPS3-206ENST00000486530 MZF1P28698 734 aaPredicted RBP20.39■□□□□ 0.86
HPS3-206ENST00000486530 STC1P52823 247 aa20.39■□□□□ 0.86
HPS3-206ENST00000486530 CDKN2DP55273 166 aa20.39■□□□□ 0.86
HPS3-206ENST00000486530 ZXDBP98169 803 aa20.39■□□□□ 0.86
HPS3-206ENST00000486530 CDH18Q13634 790 aa20.39■□□□□ 0.86
HPS3-206ENST00000486530 SPATA31D4Q6ZUB0 917 aa20.39■□□□□ 0.86
HPS3-206ENST00000486530 KLHL23Q8NBE8 558 aa20.39■□□□□ 0.86
HPS3-206ENST00000486530 TXNDC5Q8NBS9 432 aaKnown RBP20.39■□□□□ 0.86
HPS3-206ENST00000486530 LPCAT1Q8NF37 534 aa20.39■□□□□ 0.86
HPS3-206ENST00000486530 AGAP11Q8TF27 550 aa20.39■□□□□ 0.86
HPS3-206ENST00000486530 FEM1AQ9BSK4 669 aa20.39■□□□□ 0.86
HPS3-206ENST00000486530 UNKQ9C0B0 810 aaKnown RBP20.39■□□□□ 0.86
HPS3-206ENST00000486530 POMKQ9H5K3 350 aa20.39■□□□□ 0.86
HPS3-206ENST00000486530 POPDC3Q9HBV1 291 aa20.39■□□□□ 0.86
HPS3-206ENST00000486530 ZNF510Q9Y2H8 683 aa20.39■□□□□ 0.86
HPS3-206ENST00000486530 OR51B4Q9Y5P0 310 aa20.39■□□□□ 0.86
HPS3-206ENST00000486530 HELZP42694 1942 aaKnown RBP20.39■□□□□ 0.85
HPS3-206ENST00000486530 B2RBV5 119 aa20.39■□□□□ 0.85
HPS3-206ENST00000486530 HDAC3O15379 428 aa20.39■□□□□ 0.85
HPS3-206ENST00000486530 SEMA3AQ14563 771 aa20.39■□□□□ 0.85
HPS3-206ENST00000486530 RALGPS1Q5JS13 557 aa20.39■□□□□ 0.85
HPS3-206ENST00000486530 METTL21CQ5VZV1 264 aa20.39■□□□□ 0.85
HPS3-206ENST00000486530 SEL1L3Q68CR1 1132 aa20.39■□□□□ 0.85
HPS3-206ENST00000486530 NCEH1Q6PIU2 408 aa20.39■□□□□ 0.85
HPS3-206ENST00000486530 LINGO4Q6UY18 593 aa20.39■□□□□ 0.85
HPS3-206ENST00000486530 CCDC149Q6ZUS6 474 aa20.39■□□□□ 0.85
HPS3-206ENST00000486530 DCAF4L2Q8NA75 395 aa20.39■□□□□ 0.85
HPS3-206ENST00000486530 LHX3Q9UBR4 397 aa20.39■□□□□ 0.85
HPS3-206ENST00000486530 VTI1BQ9UEU0 232 aa20.39■□□□□ 0.85
HPS3-206ENST00000486530 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.39■□□□□ 0.85
HPS3-206ENST00000486530 CRYL1Q9Y2S2 319 aa20.39■□□□□ 0.85
HPS3-206ENST00000486530 ALPK3Q96L96 1907 aa20.38■□□□□ 0.85
HPS3-206ENST00000486530 SCAMP3O14828 347 aaKnown RBP20.38■□□□□ 0.85
HPS3-206ENST00000486530 PMLP29590 882 aa20.38■□□□□ 0.85
HPS3-206ENST00000486530 CPA2P48052 419 aa20.38■□□□□ 0.85
HPS3-206ENST00000486530 SLC7A9P82251 487 aa20.38■□□□□ 0.85
HPS3-206ENST00000486530 CYP4F8P98187 520 aa20.38■□□□□ 0.85
HPS3-206ENST00000486530 KDSRQ06136 332 aa20.38■□□□□ 0.85
HPS3-206ENST00000486530 DNAL1Q4LDG9 190 aa20.38■□□□□ 0.85
HPS3-206ENST00000486530 GAREM2Q75VX8 874 aa20.38■□□□□ 0.85
HPS3-206ENST00000486530 TMC8Q8IU68 726 aa20.38■□□□□ 0.85
HPS3-206ENST00000486530 PNPLA1Q8N8W4 532 aa20.38■□□□□ 0.85
HPS3-206ENST00000486530 MDGA1Q8NFP4 955 aa20.38■□□□□ 0.85
HPS3-206ENST00000486530 SP7Q8TDD2 431 aaPredicted RBP20.38■□□□□ 0.85
HPS3-206ENST00000486530 C1orf21Q9H246 121 aa20.38■□□□□ 0.85
HPS3-206ENST00000486530 VPS51Q9UID3 782 aa20.38■□□□□ 0.85
HPS3-206ENST00000486530 PCDHGC4Q9Y5F7 938 aa20.38■□□□□ 0.85
HPS3-206ENST00000486530 CKMP06732 381 aa20.37■□□□□ 0.85
HPS3-206ENST00000486530 PDHA1P08559 390 aa20.37■□□□□ 0.85
HPS3-206ENST00000486530 CSKP41240 450 aa20.37■□□□□ 0.85
HPS3-206ENST00000486530 SUOXP51687 545 aa20.37■□□□□ 0.85
HPS3-206ENST00000486530 RHOAP61586 193 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms