RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 PRAMEF10O60809 474 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 CPNE6O95741 557 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 PCCBP05166 539 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 ITIH1P19827 911 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 SERPINA4P29622 427 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 POLR2FP61218 127 aaKnown RBP13.07□□□□□ -0.32
HDAC6-227ENST00000485102 RALGDSQ12967 914 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 SQSTM1Q13501 440 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 ARHGEF7Q14155 803 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 CLEC16AQ2KHT3 1053 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 HSP90AA4PQ58FG1 418 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 PPP1R15BQ5SWA1 713 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 CFAP58Q5T655 872 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 TMEM164Q5U3C3 297 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 MON1BQ7L1V2 547 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 SRLQ86TD4 932 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 ZSCAN1Q8NBB4 408 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 PLA2G15Q8NCC3 412 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 GPBAR1Q8TDU6 330 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 USP7Q93009 1102 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 EXOC2Q96KP1 924 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 ARHGAP9Q9BRR9 750 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 TMEM63CQ9P1W3 806 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 PCDHGA3Q9Y5H0 932 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 ANKRD36A6QL64 1941 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 SDK2Q58EX2 2172 aa13.07□□□□□ -0.32
HDAC6-227ENST00000485102 J3KR12 359 aa13.06□□□□□ -0.32
HDAC6-227ENST00000485102 TRAFD1O14545 582 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-227ENST00000485102 HGSO14964 777 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-227ENST00000485102 B4GAT1O43505 415 aa13.06□□□□□ -0.32
HDAC6-227ENST00000485102 CREB3O43889 395 aa13.06□□□□□ -0.32
HDAC6-227ENST00000485102 GM2AP17900 193 aa13.06□□□□□ -0.32
HDAC6-227ENST00000485102 ETV5P41161 510 aa13.06□□□□□ -0.32
HDAC6-227ENST00000485102 SRSF6Q13247 344 aaKnown RBP13.06□□□□□ -0.32
HDAC6-227ENST00000485102 RFTN1Q14699 578 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-227ENST00000485102 TBR1Q16650 682 aa13.06□□□□□ -0.32
HDAC6-227ENST00000485102 SPECC1LQ69YQ0 1117 aa13.06□□□□□ -0.32
HDAC6-227ENST00000485102 PNCKQ6P2M8 343 aa13.06□□□□□ -0.32
HDAC6-227ENST00000485102 SCYL2Q6P3W7 929 aa13.06□□□□□ -0.32
HDAC6-227ENST00000485102 DPPA4Q7L190 304 aa13.06□□□□□ -0.32
HDAC6-227ENST00000485102 TMPRSS9Q7Z410 1059 aa13.06□□□□□ -0.32
HDAC6-227ENST00000485102 PIM3Q86V86 326 aa13.06□□□□□ -0.32
HDAC6-227ENST00000485102 ZFAND4Q86XD8 727 aa13.06□□□□□ -0.32
HDAC6-227ENST00000485102 CBARPQ8N350 705 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-227ENST00000485102 Q8N9G6 341 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-227ENST00000485102 TSEN2Q8NCE0 465 aaKnown RBP13.06□□□□□ -0.32
HDAC6-227ENST00000485102 KIAA1524Q8TCG1 905 aa13.06□□□□□ -0.32
HDAC6-227ENST00000485102 BPIFA3Q9BQP9 254 aa13.06□□□□□ -0.32
HDAC6-227ENST00000485102 TMEM168Q9H0V1 697 aa13.06□□□□□ -0.32
HDAC6-227ENST00000485102 DPEP2Q9H4A9 486 aa13.06□□□□□ -0.32
HDAC6-227ENST00000485102 MRPL40Q9NQ50 206 aaKnown RBP13.06□□□□□ -0.32
HDAC6-227ENST00000485102 GEMIN8Q9NWZ8 242 aaKnown RBP13.06□□□□□ -0.32
HDAC6-227ENST00000485102 TRNAU1APQ9NX07 287 aaKnown RBP13.06□□□□□ -0.32
HDAC6-227ENST00000485102 FOXJ2Q9P0K8 574 aa13.06□□□□□ -0.32
HDAC6-227ENST00000485102 SIK3Q9Y2K2 1263 aa13.06□□□□□ -0.32
HDAC6-227ENST00000485102 COL12A1Q99715 3063 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 A0A1W2PQ67 120 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 ANKRD62A6NC57 917 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 ARHGAP42A6NI28 874 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 PYCARD-AS1I3L0S3 204 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 EPHB6O15197 1021 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 ZW10O43264 779 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 ELFN1P0C7U0 828 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 KRT10P13645 584 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 CCNB1P14635 433 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 WT1P19544 449 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-227ENST00000485102 GPR3P46089 330 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 RGRP47804 291 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 RPL7AP62424 266 aaKnown RBP13.05□□□□□ -0.32
HDAC6-227ENST00000485102 TYRO3Q06418 890 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 BCL2L1Q07817 233 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 TRA2AQ13595 282 aaKnown RBP eCLIP13.05□□□□□ -0.32
HDAC6-227ENST00000485102 C16orf72Q14CZ0 275 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 CDKAL1Q5VV42 579 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 ENOX1Q8TC92 643 aaKnown RBP13.05□□□□□ -0.32
HDAC6-227ENST00000485102 FUCA2Q9BTY2 467 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 LGR4Q9BXB1 951 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 SLC39A8Q9C0K1 460 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 CDH19Q9H159 772 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 ADNPQ9H2P0 1102 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 SEMA6CQ9H3T2 930 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 WDR26Q9H7D7 661 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 CYP4F12Q9HCS2 524 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 NLRC4Q9NPP4 1024 aa13.05□□□□□ -0.32
HDAC6-227ENST00000485102 FAM207AQ9NSI2 230 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-227ENST00000485102 AKAP7Q9P0M2 348 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-227ENST00000485102 LRRK2Q5S007 2527 aa13.04□□□□□ -0.32
HDAC6-227ENST00000485102 PRSS38A1L453 326 aa13.04□□□□□ -0.32
HDAC6-227ENST00000485102 STMND1H3BQB6 276 aa13.04□□□□□ -0.32
HDAC6-227ENST00000485102 PPFIA2O75334 1257 aa13.04□□□□□ -0.32
HDAC6-227ENST00000485102 PALMO75781 387 aa13.04□□□□□ -0.32
HDAC6-227ENST00000485102 FGF1P05230 155 aa13.04□□□□□ -0.32
HDAC6-227ENST00000485102 FAM87AP0C7U9 286 aa13.04□□□□□ -0.32
HDAC6-227ENST00000485102 MYCLP1P12525 358 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-227ENST00000485102 TEAD1P28347 426 aa13.04□□□□□ -0.32
HDAC6-227ENST00000485102 KLK7P49862 253 aa13.04□□□□□ -0.32
HDAC6-227ENST00000485102 PAPOLAP51003 745 aaKnown RBP13.04□□□□□ -0.32
HDAC6-227ENST00000485102 ZNF135P52742 658 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-227ENST00000485102 TPI1P60174 286 aa13.04□□□□□ -0.32
HDAC6-227ENST00000485102 AP1S1P61966 158 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms