RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 SLC46A1Q96NT5 459 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 TSGA13Q96PP4 275 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 RNF157Q96PX1 679 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 IL12RB2Q99665 862 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 CINPQ9BW66 212 aaPredicted RBP10.08□□□□□ -0.8
CPSF4-213ENST00000484112 MAK16Q9BXY0 300 aaKnown RBP10.08□□□□□ -0.8
CPSF4-213ENST00000484112 BRD8Q9H0E9 1235 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 GRPEL1Q9HAV7 217 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.08□□□□□ -0.8
CPSF4-213ENST00000484112 ENTPD2Q9Y5L3 495 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 HS3ST3A1Q9Y663 406 aa10.08□□□□□ -0.8
CPSF4-213ENST00000484112 HELZ2Q9BYK8 2649 aaKnown RBP10.07□□□□□ -0.8
CPSF4-213ENST00000484112 SPTY2D1-AS1A0A0U1RR47 76 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.07□□□□□ -0.8
CPSF4-213ENST00000484112 CCDC66A2RUB6 948 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 LRRD1A4D1F6 860 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 PMS2P1A4D2B8 440 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 TMEM110-MUSTN1A8MSY1 372 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 J3KR12 359 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 K7ENP7 123 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 FPGTO14772 594 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 MUSKO15146 869 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 RAD51BO15315 384 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 AQP9O43315 295 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 MAFKO60675 156 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 ZNF189O75820 626 aaPredicted RBP10.07□□□□□ -0.8
CPSF4-213ENST00000484112 TNFSF15O95150 251 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 WISP1O95388 367 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 CSF2P04141 144 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 CD48P09326 243 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 JUNDP17535 347 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 NFKBIAP25963 317 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 GARSP41250 739 aaKnown RBP10.07□□□□□ -0.8
CPSF4-213ENST00000484112 NR2C2P49116 596 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 COPS2P61201 443 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 AP1S1P61966 158 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 RPS21P63220 83 aaKnown RBP10.07□□□□□ -0.8
CPSF4-213ENST00000484112 SGCGQ13326 291 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 C1orf61Q13536 156 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 FGL2Q14314 439 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 LBRQ14739 615 aaKnown RBP10.07□□□□□ -0.8
CPSF4-213ENST00000484112 CYTH1Q15438 398 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 NR0B2Q15466 257 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 TAZQ16635 292 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 ATP13A4Q4VNC1 1196 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 KIAA1161Q6NSJ0 714 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 INO80CQ6PI98 192 aaPredicted RBP10.07□□□□□ -0.8
CPSF4-213ENST00000484112 GDPD4Q6W3E5 623 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 KYAT3Q6YP21 454 aaKnown RBP10.07□□□□□ -0.8
CPSF4-213ENST00000484112 RBM44Q6ZP01 1051 aaKnown RBP10.07□□□□□ -0.8
CPSF4-213ENST00000484112 ZNF662Q6ZS27 426 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 DAAM2Q86T65 1068 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 PARGQ86W56 976 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 RCOR2Q8IZ40 523 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 RYBPQ8N488 228 aaPredicted RBP10.07□□□□□ -0.8
CPSF4-213ENST00000484112 TEX26Q8N6G2 289 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 EXD1Q8NHP7 514 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 TPCN2Q8NHX9 752 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 KIAA1524Q8TCG1 905 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.07□□□□□ -0.8
CPSF4-213ENST00000484112 RAPGEF5Q92565 580 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 HDAC11Q96DB2 347 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 RBM41Q96IZ5 413 aaKnown RBP10.07□□□□□ -0.8
CPSF4-213ENST00000484112 TM6SF2Q9BZW4 377 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 ZDHHC6Q9H6R6 413 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 LHX3Q9UBR4 397 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 KLF15Q9UIH9 416 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 EFR3BQ9Y2G0 817 aa10.07□□□□□ -0.8
CPSF4-213ENST00000484112 REXO2Q9Y3B8 237 aaKnown RBP10.07□□□□□ -0.8
CPSF4-213ENST00000484112 FLNBO75369 2602 aaKnown RBP10.06□□□□□ -0.8
CPSF4-213ENST00000484112 TSPAN11A1L157 253 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 EME2A4GXA9 379 aaPredicted RBP10.06□□□□□ -0.8
CPSF4-213ENST00000484112 C3orf70A6NLC5 250 aaPredicted RBP10.06□□□□□ -0.8
CPSF4-213ENST00000484112 MIF4GDA9UHW6 222 aaKnown RBP10.06□□□□□ -0.8
CPSF4-213ENST00000484112 KRIT1O00522 736 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 NEMP1O14524 444 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 APOL1O14791 398 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 CASC3O15234 703 aaKnown RBP10.06□□□□□ -0.8
CPSF4-213ENST00000484112 SPINT1O43278 529 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 TSPAN6O43657 245 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 KRT86O43790 486 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 ZRANB2O95218 330 aaKnown RBP eCLIP10.06□□□□□ -0.8
CPSF4-213ENST00000484112 PEX11BO96011 259 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 KRT1P04264 644 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 ADRB3P13945 408 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 NME1P15531 152 aaKnown RBP10.06□□□□□ -0.8
CPSF4-213ENST00000484112 CTNNA2P26232 953 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 SERPINA4P29622 427 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 CTNNA1P35221 906 aaKnown RBP10.06□□□□□ -0.8
CPSF4-213ENST00000484112 GJC1P36383 396 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 CETN2P41208 172 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 RABIFP47224 123 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 NAP1L1P55209 391 aaKnown RBP10.06□□□□□ -0.8
CPSF4-213ENST00000484112 POLR2LP62875 67 aaKnown RBP10.06□□□□□ -0.8
CPSF4-213ENST00000484112 NFATC3Q12968 1075 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 MMRN1Q13201 1228 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 ZNF235Q14590 738 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 PPP2R5EQ16537 467 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 TMEM259Q4ZIN3 620 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 TFDP3Q5H9I0 405 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms