RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 SSUH2Q9Y2M2 353 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 DGKBQ9Y6T7 804 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 PIEZO2Q9H5I5 2752 aa18.08■□□□□ 0.48
ATG4B-221ENST00000483778 CFAP69A5D8W1 941 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 MAFKO60675 156 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 TCEA3O75764 348 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 TNFSF15O95150 251 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 ZIC2O95409 532 aaPredicted RBP18.07■□□□□ 0.48
ATG4B-221ENST00000483778 ALPIP09923 528 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 ELFN1P0C7U0 828 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 DESP17661 470 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 CR2P20023 1033 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 HTR1BP28222 390 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 RBMS1P29558 406 aaKnown RBP18.07■□□□□ 0.48
ATG4B-221ENST00000483778 MAXP61244 160 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 SPIDRQ14159 915 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 IHHQ14623 411 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 RFTN1Q14699 578 aaPredicted RBP18.07■□□□□ 0.48
ATG4B-221ENST00000483778 ACOX1Q15067 660 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 DPYSL2Q16555 572 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 FILIP1LQ4L180 1135 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 PNCKQ6P2M8 343 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 RFLNAQ6ZTI6 216 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 CBARPQ8N350 705 aaPredicted RBP18.07■□□□□ 0.48
ATG4B-221ENST00000483778 Q8N9G6 341 aaPredicted RBP18.07■□□□□ 0.48
ATG4B-221ENST00000483778 GPR156Q8NFN8 814 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 OR56A4Q8NGH8 313 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 CSPG4P5Q96PW8 444 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 THSD1Q9NS62 852 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 SEPT3Q9UH03 358 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 PCDHGA8Q9Y5G5 932 aa18.07■□□□□ 0.48
ATG4B-221ENST00000483778 HTRA2O43464 458 aaPredicted RBP18.06■□□□□ 0.48
ATG4B-221ENST00000483778 NOBOXO60393 691 aa18.06■□□□□ 0.48
ATG4B-221ENST00000483778 HGFP14210 728 aa18.06■□□□□ 0.48
ATG4B-221ENST00000483778 IL4RP24394 825 aa18.06■□□□□ 0.48
ATG4B-221ENST00000483778 PCK1P35558 622 aa18.06■□□□□ 0.48
ATG4B-221ENST00000483778 KIAA1024LP59773 190 aa18.06■□□□□ 0.48
ATG4B-221ENST00000483778 TRAF2Q12933 501 aa18.06■□□□□ 0.48
ATG4B-221ENST00000483778 MMRN1Q13201 1228 aa18.06■□□□□ 0.48
ATG4B-221ENST00000483778 TMCO4Q5TGY1 634 aa18.06■□□□□ 0.48
ATG4B-221ENST00000483778 OGFOD3Q6PK18 319 aa18.06■□□□□ 0.48
ATG4B-221ENST00000483778 TMPRSS9Q7Z410 1059 aa18.06■□□□□ 0.48
ATG4B-221ENST00000483778 HSD11B1LQ7Z5J1 315 aa18.06■□□□□ 0.48
ATG4B-221ENST00000483778 TAF8Q7Z7C8 310 aa18.06■□□□□ 0.48
ATG4B-221ENST00000483778 GKN2Q86XP6 184 aa18.06■□□□□ 0.48
ATG4B-221ENST00000483778 FAM46DQ8NEK8 389 aa18.06■□□□□ 0.48
ATG4B-221ENST00000483778 WDR36Q8NI36 951 aaKnown RBP18.06■□□□□ 0.48
ATG4B-221ENST00000483778 SCG3Q8WXD2 468 aaKnown RBP18.06■□□□□ 0.48
ATG4B-221ENST00000483778 THAP2Q9H0W7 228 aa18.06■□□□□ 0.48
ATG4B-221ENST00000483778 PCDH18Q9HCL0 1135 aa18.06■□□□□ 0.48
ATG4B-221ENST00000483778 CYP4F12Q9HCS2 524 aa18.06■□□□□ 0.48
ATG4B-221ENST00000483778 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.06■□□□□ 0.48
ATG4B-221ENST00000483778 ATXN7L1Q9ULK2 861 aaPredicted RBP18.06■□□□□ 0.48
ATG4B-221ENST00000483778 COL6A6A6NMZ7 2263 aa18.06■□□□□ 0.48
ATG4B-221ENST00000483778 CCDC187A0A096LP49 1063 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 TEX51A0A1B0GUA7 166 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 H3BRJ5 948 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 TK2O00142 265 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 EFSO43281 561 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 RPLP0P05388 317 aaKnown RBP18.05■□□□□ 0.48
ATG4B-221ENST00000483778 CD48P09326 243 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 PBX1P40424 430 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 AP1S1P61966 158 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 POLR2LP62875 67 aaKnown RBP18.05■□□□□ 0.48
ATG4B-221ENST00000483778 CNGA3Q16281 694 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 ATP13A4Q4VNC1 1196 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 DENND2CQ68D51 928 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 TSPAN33Q86UF1 283 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 ZNF843Q8N446 348 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 LZTR1Q8N653 840 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 PAF1Q8N7H5 531 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 PDCD6IPQ8WUM4 868 aaKnown RBP18.05■□□□□ 0.48
ATG4B-221ENST00000483778 GRAMD1AQ96CP6 724 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 ZNF599Q96NL3 588 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 GFM1Q96RP9 751 aaKnown RBP18.05■□□□□ 0.48
ATG4B-221ENST00000483778 LRRN3Q9H3W5 708 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 SUDS3Q9H7L9 328 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-221ENST00000483778 EPB41L5Q9HCM4 733 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 SPATS2LQ9NUQ6 558 aaKnown RBP18.05■□□□□ 0.48
ATG4B-221ENST00000483778 MOSPD1Q9UJG1 213 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 ST14Q9Y5Y6 855 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 SCINQ9Y6U3 715 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 RNF215Q9Y6U7 377 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 ZNF462Q96JM2 2506 aa18.05■□□□□ 0.48
ATG4B-221ENST00000483778 A0A087X0T9 212 aa18.04■□□□□ 0.48
ATG4B-221ENST00000483778 CACNB4O00305 520 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-221ENST00000483778 HOXC4P09017 264 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-221ENST00000483778 FAM228BP0C875 321 aa18.04■□□□□ 0.48
ATG4B-221ENST00000483778 LHCGRP22888 699 aa18.04■□□□□ 0.48
ATG4B-221ENST00000483778 RENBPP51606 427 aa18.04■□□□□ 0.48
ATG4B-221ENST00000483778 TMPRSS3P57727 454 aa18.04■□□□□ 0.48
ATG4B-221ENST00000483778 SLC25A11Q02978 314 aaKnown RBP18.04■□□□□ 0.48
ATG4B-221ENST00000483778 BOLA3Q53S33 107 aa18.04■□□□□ 0.48
ATG4B-221ENST00000483778 BROXQ5VW32 411 aa18.04■□□□□ 0.48
ATG4B-221ENST00000483778 TMCO3Q6UWJ1 677 aa18.04■□□□□ 0.48
ATG4B-221ENST00000483778 CLEC14AQ86T13 490 aa18.04■□□□□ 0.48
ATG4B-221ENST00000483778 NRROSQ86YC3 692 aa18.04■□□□□ 0.48
ATG4B-221ENST00000483778 LRRN4Q8WUT4 740 aa18.04■□□□□ 0.48
ATG4B-221ENST00000483778 CPLX3Q8WVH0 158 aa18.04■□□□□ 0.48
ATG4B-221ENST00000483778 NUDCD1Q96RS6 583 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms