RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 CCDC185Q8N715 623 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 S100ZQ8WXG8 99 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 HTRA1Q92743 480 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 HDAC11Q96DB2 347 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 VMP1Q96GC9 406 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 GPR78Q96P69 363 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 TRIT1Q9H3H1 467 aaKnown RBP11.85□□□□□ -0.51
VTI1A-205ENST00000483122 POMKQ9H5K3 350 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 TSPAN16Q9UKR8 245 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 V9GYQ6 96 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 NR5A2O00482 541 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 OGTO15294 1046 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 PGK1P00558 417 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 ALDH4A1P30038 563 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 FPGSQ05932 587 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 IFRD2Q12894 506 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-205ENST00000483122 SLC13A2Q13183 592 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 SLC12A1Q13621 1099 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 IMPG1Q17R60 797 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 GEN1Q17RS7 908 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 DPY19L1Q2PZI1 675 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 PMF1Q6P1K2 205 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 ZC3HC1Q86WB0 502 aaKnown RBP11.85□□□□□ -0.51
VTI1A-205ENST00000483122 KIAA2013Q8IYS2 634 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 DNAAF3Q8N9W5 541 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 SMG8Q8ND04 991 aaKnown RBP11.85□□□□□ -0.51
VTI1A-205ENST00000483122 CALML6Q8TD86 181 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 PRMT6Q96LA8 375 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-205ENST00000483122 APOL2Q9BQE5 337 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 OSBPL10Q9BXB5 764 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 B3GNT5Q9BYG0 378 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 TMEM134Q9H6X4 195 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 CYP4F12Q9HCS2 524 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 JPH1Q9HDC5 661 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-205ENST00000483122 LTB4R2Q9NPC1 389 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 HACD3Q9P035 362 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 ACTR3BQ9P1U1 418 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 ABCD2Q9UBJ2 740 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 GJA3Q9Y6H8 435 aa11.85□□□□□ -0.51
VTI1A-205ENST00000483122 ILVBLA1L0T0 632 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 HACD1B0YJ81 288 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 ZNF487B1APH4 448 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 RGS13O14921 159 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 MSCO60682 206 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 RGS20O76081 388 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 TOMM70O94826 608 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 INMTO95050 263 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 CHRNB1P11230 501 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 VDRP11473 427 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 TPH1P17752 444 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 SERPINB1P30740 379 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 CD68P34810 354 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-205ENST00000483122 CBX2Q14781 532 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-205ENST00000483122 TMEM236Q5W0B7 351 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 CATSPER4Q7RTX7 472 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 PID1Q7Z2X4 250 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 GALNT13Q8IUC8 556 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 ARMC8Q8IUR7 673 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 CEP97Q8IW35 865 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 TMEM192Q8IY95 271 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 C12orf29Q8N999 325 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 CCNYQ8ND76 341 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 NDNFQ8TB73 568 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 ROPN1LQ96C74 230 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 MAGED4Q96JG8 741 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 BTN2A3PQ96KV6 586 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 GMLQ99445 158 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 MRIQ9BWK5 157 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 RHOBTB2Q9BYZ6 727 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 LRRC4Q9HBW1 653 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 BAG5Q9UL15 447 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 USP3Q9Y6I4 520 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 PMF1-BGLAPU3KQ54 211 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 H0YAE9 185 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 MAN1A2O60476 641 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 NADKO95544 446 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-205ENST00000483122 ENO2P09104 434 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-205ENST00000483122 ALDOCP09972 364 aaKnown RBP11.84□□□□□ -0.51
VTI1A-205ENST00000483122 HSD17B1P14061 328 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 NMBRP28336 390 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 LSM3P62310 102 aaKnown RBP11.84□□□□□ -0.51
VTI1A-205ENST00000483122 ECT2LQ008S8 904 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 SKIV2LQ15477 1246 aaKnown RBP11.84□□□□□ -0.51
VTI1A-205ENST00000483122 VPS26BQ4G0F5 336 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 IFNEQ86WN2 208 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 MUL1Q969V5 352 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 TXNDC15Q96J42 360 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 SLC30A3Q99726 388 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 CLSTN3Q9BQT9 956 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 C8orf4Q9NR00 106 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 INTS10Q9NVR2 710 aaKnown RBP11.84□□□□□ -0.51
VTI1A-205ENST00000483122 BFARQ9NZS9 450 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 GMIPQ9P107 970 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 SLCO3A1Q9UIG8 710 aa11.84□□□□□ -0.51
VTI1A-205ENST00000483122 MAGED1Q9Y5V3 778 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-205ENST00000483122 ANK1P16157 1881 aa11.83□□□□□ -0.51
VTI1A-205ENST00000483122 TCRBV5S2A0A599 114 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 FXYD1O00168 92 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 KCNK1O00180 336 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 GABBR2O75899 941 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms