RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 SNX10Q9Y5X0 201 aa14.35□□□□□ -0.11
COL9A2-207ENST00000482722 NUP205Q92621 2012 aa14.35□□□□□ -0.11
COL9A2-207ENST00000482722 CDH23Q9H251 3354 aa14.35□□□□□ -0.11
COL9A2-207ENST00000482722 BCL10O95999 233 aa14.35□□□□□ -0.11
COL9A2-207ENST00000482722 MAP3K7CLP57077 242 aa14.35□□□□□ -0.11
COL9A2-207ENST00000482722 SOX4Q06945 474 aaPredicted RBP14.35□□□□□ -0.11
COL9A2-207ENST00000482722 MFSD10Q14728 455 aa14.35□□□□□ -0.11
COL9A2-207ENST00000482722 SAMD4BQ5PRF9 694 aaKnown RBP14.35□□□□□ -0.11
COL9A2-207ENST00000482722 ZNF280DQ6N043 979 aa14.35□□□□□ -0.11
COL9A2-207ENST00000482722 ABRAXAS1Q6UWZ7 409 aa14.35□□□□□ -0.11
COL9A2-207ENST00000482722 STRADAQ7RTN6 431 aa14.35□□□□□ -0.11
COL9A2-207ENST00000482722 LRRC52Q8N7C0 313 aa14.35□□□□□ -0.11
COL9A2-207ENST00000482722 ARRDC4Q8NCT1 418 aa14.35□□□□□ -0.11
COL9A2-207ENST00000482722 OR9I1Q8NGQ6 314 aa14.35□□□□□ -0.11
COL9A2-207ENST00000482722 MAELQ96JY0 434 aaKnown RBP14.35□□□□□ -0.11
COL9A2-207ENST00000482722 NANOGQ9H9S0 305 aa14.35□□□□□ -0.11
COL9A2-207ENST00000482722 TMEM181Q9P2C4 612 aa14.35□□□□□ -0.11
COL9A2-207ENST00000482722 B3GNT3Q9Y2A9 372 aa14.35□□□□□ -0.11
COL9A2-207ENST00000482722 GIT1Q9Y2X7 761 aa14.35□□□□□ -0.11
COL9A2-207ENST00000482722 PDE4DIPQ5VU43 2346 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 SMIM28A0A1B0GU29 152 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 HACD1B0YJ81 288 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 MRASO14807 208 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 ZBTB24O43167 697 aaPredicted RBP14.34□□□□□ -0.11
COL9A2-207ENST00000482722 HUS1O60921 280 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 APOA4P06727 396 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 SOX11P35716 441 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 CTBP1Q13363 440 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 NOTUMQ6P988 496 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 NANOGNBQ7Z5D8 188 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 TMEM135Q86UB9 458 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 STON2Q8WXE9 905 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 NXNL1Q96CM4 212 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 TSNARE1Q96NA8 513 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 C1orf50Q9BV19 199 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 IL1RL2Q9HB29 575 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 TMEM9Q9P0T7 183 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 LSM1O15116 133 aaKnown RBP14.34□□□□□ -0.11
COL9A2-207ENST00000482722 SRP72O76094 671 aaKnown RBP14.34□□□□□ -0.11
COL9A2-207ENST00000482722 DDHD2O94830 711 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 PLK1P53350 603 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 CRHR2Q13324 411 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 DEPDC1Q5TB30 811 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 RASAL3Q86YV0 1011 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 DENND6AQ8IWF6 608 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 PNPLA1Q8N8W4 532 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 B3GALNT2Q8NCR0 500 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 RDH11Q8TC12 318 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 WNT8BQ93098 351 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 CCM2LQ9NUG4 571 aaPredicted RBP14.34□□□□□ -0.11
COL9A2-207ENST00000482722 CROTQ9UKG9 612 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 UBQLN1Q9UMX0 589 aaKnown RBP14.34□□□□□ -0.11
COL9A2-207ENST00000482722 OAZ3Q9UMX2 235 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 CPQQ9Y646 472 aa14.34□□□□□ -0.11
COL9A2-207ENST00000482722 ATP6AP2A0A1C7CYW4 349 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 TNPO2O14787 897 aaKnown RBP14.33□□□□□ -0.11
COL9A2-207ENST00000482722 KDM1AO60341 852 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 ATP6AP2O75787 350 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 CLPXO76031 633 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 TOMM70O94826 608 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 SLC35E2BP0CK96 405 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 PABPC1P11940 636 aaKnown RBP14.33□□□□□ -0.11
COL9A2-207ENST00000482722 ERCC2P18074 760 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 LRPAP1P30533 357 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 ACADSBP45954 432 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 GRSF1Q12849 480 aaKnown RBP eCLIP14.33□□□□□ -0.11
COL9A2-207ENST00000482722 ZBTB17Q13105 803 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 OXA1LQ15070 435 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 PLCL1Q15111 1095 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 ZBTB6Q15916 424 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 MORN1Q5T089 497 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 OTUD1Q5VV17 481 aaPredicted RBP14.33□□□□□ -0.11
COL9A2-207ENST00000482722 OSTM1Q86WC4 334 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 RNF135Q8IUD6 432 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 CENPLQ8N0S6 344 aaPredicted RBP14.33□□□□□ -0.11
COL9A2-207ENST00000482722 TMCO5AQ8N6Q1 288 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 OR13F1Q8NGS4 319 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 USP33Q8TEY7 942 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 STYXQ8WUJ0 223 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 SEPT8Q92599 483 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 EMID1Q96A84 441 aaPredicted RBP14.33□□□□□ -0.11
COL9A2-207ENST00000482722 PLEKHA5Q9HAU0 1116 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 TNFRSF12AQ9NP84 129 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 GABRQQ9UN88 632 aa14.33□□□□□ -0.11
COL9A2-207ENST00000482722 TIMM13Q9Y5L4 95 aaPredicted RBP14.33□□□□□ -0.11
COL9A2-207ENST00000482722 TTC3P53804 2025 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 TRPC5OSA6NMA1 111 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 ZNF487B1APH4 448 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 KPNA4O00629 521 aaPredicted RBP14.33□□□□□ -0.12
COL9A2-207ENST00000482722 TIMM44O43615 452 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 PTPN3P26045 913 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 IDUAP35475 653 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 ANO4Q32M45 955 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 GNASQ5JWF2 1037 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 C6orf183Q5T699 404 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 CNSTQ6PJW8 725 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 SPPL2CQ8IUH8 684 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 PSTKQ8IV42 348 aaKnown RBP14.33□□□□□ -0.12
COL9A2-207ENST00000482722 CEP97Q8IW35 865 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 CADM3Q8N126 398 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms