RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 AHDC1Q5TGY3 1603 aaPredicted RBP12.74□□□□□ -0.37
VPS52-218ENST00000482399 ZSCAN9O15535 394 aaPredicted RBP12.74□□□□□ -0.37
VPS52-218ENST00000482399 RHOBTB1O94844 696 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 CHEK2O96017 543 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 MYL3P08590 195 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 HECTD2Q5U5R9 776 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 ZC3H7AQ8IWR0 971 aaKnown RBP12.74□□□□□ -0.37
VPS52-218ENST00000482399 SMYD1Q8NB12 490 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 CDC26Q8NHZ8 85 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 PCED1BQ96HM7 432 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 C3orf30Q96M34 536 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 ACOX2Q99424 681 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 OSBPL2Q9H1P3 480 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 GLOD4Q9HC38 313 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 ZNF229Q9UJW7 825 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 RNF112Q9ULX5 631 aa12.74□□□□□ -0.37
VPS52-218ENST00000482399 ASB14A6NK59 587 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 DCLK1O15075 740 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 APLP1P51693 650 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 SPIDRQ14159 915 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 POLD3Q15054 466 aaPredicted RBP12.73□□□□□ -0.37
VPS52-218ENST00000482399 PKDCCQ504Y2 493 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 MILR1Q7Z6M3 343 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 EFHBQ8N7U6 833 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 FNDC5Q8NAU1 212 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 OR10Q1Q8NGQ4 319 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 TSPAN17Q96FV3 270 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 FAR2Q96K12 515 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 SNX27Q96L92 541 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 KLHL25Q9H0H3 589 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 PLK2Q9NYY3 685 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 SUCOQ9UBS9 1254 aaKnown RBP12.73□□□□□ -0.37
VPS52-218ENST00000482399 USP22Q9UPT9 525 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 MAGED1Q9Y5V3 778 aaPredicted RBP12.73□□□□□ -0.37
VPS52-218ENST00000482399 CFAP99D6REC4 459 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 SNX2O60749 519 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 POMCP01189 267 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 SBK3P0C264 359 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 PLA2G4EQ3MJ16 856 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 TAC4Q86UU9 113 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 LRRC52Q8N7C0 313 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 TBATAQ96M53 351 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 VRTNQ9H8Y1 702 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 ANAPC2Q9UJX6 822 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 MEIS3P2A8K0S8 358 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 RSL1D1O76021 490 aaKnown RBP12.73□□□□□ -0.37
VPS52-218ENST00000482399 CCNA2P20248 432 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 IREB2P48200 963 aaKnown RBP12.73□□□□□ -0.37
VPS52-218ENST00000482399 KPNA1P52294 538 aaPredicted RBP12.73□□□□□ -0.37
VPS52-218ENST00000482399 RAD23AP54725 363 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 MCCD1P59942 119 aaPredicted RBP12.73□□□□□ -0.37
VPS52-218ENST00000482399 RAB39AQ14964 217 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 PAFAH1B3Q15102 231 aaKnown RBP12.73□□□□□ -0.37
VPS52-218ENST00000482399 MFSD6LQ8IWD5 586 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 TWIST2Q8WVJ9 160 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 LZICQ8WZA0 190 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 CENPIQ92674 756 aaPredicted RBP12.73□□□□□ -0.37
VPS52-218ENST00000482399 C17orf80Q9BSJ5 609 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 RCOR3Q9P2K3 495 aaPredicted RBP12.73□□□□□ -0.37
VPS52-218ENST00000482399 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.73□□□□□ -0.37
VPS52-218ENST00000482399 SCN1AP35498 2009 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 DNAH12Q6ZR08 3092 aa12.73□□□□□ -0.37
VPS52-218ENST00000482399 K7EPI3 171 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 NME4O00746 187 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 NOBOXO60393 691 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 SLC25A27O95847 323 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 IL7RP16871 459 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 FMO4P31512 558 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 PRKAA2P54646 552 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 LIPEQ05469 1076 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 HMBOX1Q6NT76 420 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 CLEC14AQ86T13 490 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 RETREG3Q86VR2 466 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 CDYL2Q8N8U2 506 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 CCDC126Q96EE4 140 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 PLEKHA8Q96JA3 519 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 EXOC2Q96KP1 924 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 FCRL2Q96LA5 508 aaPredicted RBP12.72□□□□□ -0.37
VPS52-218ENST00000482399 C12orf42Q96LP6 360 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 NSMCE2Q96MF7 247 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 CYP2S1Q96SQ9 504 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 SLC39A8Q9C0K1 460 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 EPB41L1Q9H4G0 881 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 FBXW11Q9UKB1 542 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 ADAMTS5Q9UNA0 930 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 TCAF1Q9Y4C2 921 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 CCDC154A6NI56 674 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 AZIN1O14977 448 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 ARPC2O15144 300 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 USP2O75604 605 aaPredicted RBP12.72□□□□□ -0.37
VPS52-218ENST00000482399 HLA-DQB2P05538 268 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 RPS9P46781 194 aaKnown RBP12.72□□□□□ -0.37
VPS52-218ENST00000482399 PIK3CGP48736 1102 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 IST1P53990 364 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 FOXA1P55317 472 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 DAOAP59103 153 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 DSC2Q02487 901 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 LAPTM5Q13571 262 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 ZBED5Q49AG3 693 aa12.72□□□□□ -0.37
VPS52-218ENST00000482399 CROCCP3Q8IVE0 287 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms