RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 ABATP80404 500 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 SORDQ00796 357 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 MMEL1Q495T6 779 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 C6orf141Q5SZD1 244 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 FNBP1LQ5T0N5 605 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 CCDC129Q6ZRS4 1044 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 PALB2Q86YC2 1186 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 WDR63Q8IWG1 891 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 PELI3Q8N2H9 469 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 MIGA1Q8NAN2 632 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 SCFD2Q8WU76 684 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 TRIB2Q92519 343 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 NSUN4Q96CB9 384 aaKnown RBP5.84□□□□□ -1.47
SF3B1-210ENST00000482158 HMCESQ96FZ2 354 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 RSRC1Q96IZ7 334 aaKnown RBP5.84□□□□□ -1.47
SF3B1-210ENST00000482158 C1orf74Q96LT6 269 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 CMTM3Q96MX0 182 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 FAM234AQ9H0X4 552 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 HAUS2Q9NVX0 235 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 OR6C3Q9NZP0 311 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 VPS28Q9UK41 221 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 STON1Q9Y6Q2 735 aa5.84□□□□□ -1.47
SF3B1-210ENST00000482158 KAT6BQ8WYB5 2073 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 TMEM202A6NGA9 273 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 PTGES3LE9PB15 166 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 WNT9BO14905 357 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 VILLO15195 856 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 ITM2AO43736 263 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 GJB3O75712 270 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 NDUFB4O95168 129 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 IPO7O95373 1038 aaKnown RBP5.83□□□□□ -1.48
SF3B1-210ENST00000482158 CYC1P08574 325 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 KRT10P13645 584 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 NAGAP17050 411 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 PPARGP37231 505 aaPredicted RBP5.83□□□□□ -1.48
SF3B1-210ENST00000482158 ENTPD1P49961 510 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 CLCN3P51790 818 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 CLNS1AP54105 237 aaKnown RBP5.83□□□□□ -1.48
SF3B1-210ENST00000482158 GOLGA8DPQ0D2H9 430 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 NAE1Q13564 534 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 USP41Q3LFD5 358 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 DNTTIP2Q5QJE6 756 aaKnown RBP5.83□□□□□ -1.48
SF3B1-210ENST00000482158 GKAP1Q5VSY0 366 aaPredicted RBP5.83□□□□□ -1.48
SF3B1-210ENST00000482158 C16orf54Q6UWD8 224 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 GSTA5Q7RTV2 222 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 CCDC13Q8IYE1 715 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 AADATQ8N5Z0 425 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 AGBL3Q8NEM8 1001 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 ASB5Q8WWX0 329 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 OTULINQ96BN8 352 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 ARHGEF26Q96DR7 871 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 TIGD1Q96MW7 591 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 ZNF570Q96NI8 536 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 FTOQ9C0B1 505 aaKnown RBP eCLIP5.83□□□□□ -1.48
SF3B1-210ENST00000482158 EBF3Q9H4W6 596 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 WDR26Q9H7D7 661 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 RANGRFQ9HD47 186 aaPredicted RBP5.83□□□□□ -1.48
SF3B1-210ENST00000482158 IL36RNQ9UBH0 155 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 SLC45A1Q9Y2W3 748 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 PTGDR2Q9Y5Y4 395 aa5.83□□□□□ -1.48
SF3B1-210ENST00000482158 MYO1GB0I1T2 1018 aa5.82□□□□□ -1.48
SF3B1-210ENST00000482158 H3BNX3 289 aa5.82□□□□□ -1.48
SF3B1-210ENST00000482158 MTA2O94776 668 aa5.82□□□□□ -1.48
SF3B1-210ENST00000482158 ZNF182P17025 639 aaPredicted RBP5.82□□□□□ -1.48
SF3B1-210ENST00000482158 ARRB2P32121 409 aa5.82□□□□□ -1.48
SF3B1-210ENST00000482158 NLRP5P59047 1200 aa5.82□□□□□ -1.48
SF3B1-210ENST00000482158 CREB5Q02930 508 aa5.82□□□□□ -1.48
SF3B1-210ENST00000482158 Q0VFX4 171 aa5.82□□□□□ -1.48
SF3B1-210ENST00000482158 IRF3Q14653 427 aa5.82□□□□□ -1.48
SF3B1-210ENST00000482158 DUSP28Q4G0W2 176 aa5.82□□□□□ -1.48
SF3B1-210ENST00000482158 CDONQ4KMG0 1287 aa5.82□□□□□ -1.48
SF3B1-210ENST00000482158 FSCBQ5H9T9 825 aa5.82□□□□□ -1.48
SF3B1-210ENST00000482158 OTUD1Q5VV17 481 aaPredicted RBP5.82□□□□□ -1.48
SF3B1-210ENST00000482158 CLEC17AQ6ZS10 378 aa5.82□□□□□ -1.48
SF3B1-210ENST00000482158 BRINP3Q76B58 766 aa5.82□□□□□ -1.48
SF3B1-210ENST00000482158 PRR26Q8N8Z3 221 aa5.82□□□□□ -1.48
SF3B1-210ENST00000482158 SCCPDHQ8NBX0 429 aa5.82□□□□□ -1.48
SF3B1-210ENST00000482158 IGSF8Q969P0 613 aa5.82□□□□□ -1.48
SF3B1-210ENST00000482158 TMEM68Q96MH6 324 aa5.82□□□□□ -1.48
SF3B1-210ENST00000482158 TMEM47Q9BQJ4 181 aa5.82□□□□□ -1.48
SF3B1-210ENST00000482158 SQORQ9Y6N5 450 aa5.82□□□□□ -1.48
SF3B1-210ENST00000482158 CACNA1IQ9P0X4 2223 aa5.82□□□□□ -1.48
SF3B1-210ENST00000482158 IGHV4-28A0A0C4DH34 117 aa5.81□□□□□ -1.48
SF3B1-210ENST00000482158 A0A1B0GVM2 712 aa5.81□□□□□ -1.48
SF3B1-210ENST00000482158 K7ENM7 598 aa5.81□□□□□ -1.48
SF3B1-210ENST00000482158 VWA5AO00534 786 aa5.81□□□□□ -1.48
SF3B1-210ENST00000482158 HSPA12AO43301 675 aa5.81□□□□□ -1.48
SF3B1-210ENST00000482158 HNRNPCL1O60812 293 aaKnown RBP5.81□□□□□ -1.48
SF3B1-210ENST00000482158 VNN2O95498 520 aa5.81□□□□□ -1.48
SF3B1-210ENST00000482158 ALOX12P18054 663 aa5.81□□□□□ -1.48
SF3B1-210ENST00000482158 EIF2S3P41091 472 aaKnown RBP5.81□□□□□ -1.48
SF3B1-210ENST00000482158 MC1RQ01726 317 aa5.81□□□□□ -1.48
SF3B1-210ENST00000482158 ROR2Q01974 943 aaKnown RBP5.81□□□□□ -1.48
SF3B1-210ENST00000482158 EFNB3Q15768 340 aa5.81□□□□□ -1.48
SF3B1-210ENST00000482158 KRT24Q2M2I5 525 aa5.81□□□□□ -1.48
SF3B1-210ENST00000482158 SOWAHCQ53LP3 525 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-210ENST00000482158 JADE1Q6IE81 842 aa5.81□□□□□ -1.48
SF3B1-210ENST00000482158 SARM1Q6SZW1 724 aa5.81□□□□□ -1.48
SF3B1-210ENST00000482158 GLDNQ6ZMI3 551 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-210ENST00000482158 PQLC2Q6ZP29 291 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 176.4 ms