RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 RIPPLY3P57055 190 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 SELENOVP59797 346 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 ZP1P60852 638 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 PKP1Q13835 747 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 ERV3-1Q14264 604 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 GPR68Q15743 365 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 NFIL3Q16649 462 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 ME3Q16798 604 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 EDRF1Q3B7T1 1238 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 DNTTIP2Q5QJE6 756 aaKnown RBP3.85□□□□□ -1.79
COPA-204ENST00000481522 IL20RBQ6UXL0 311 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.85□□□□□ -1.79
COPA-204ENST00000481522 CPXM2Q8N436 756 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 ENGASEQ8NFI3 743 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 TNIP2Q8NFZ5 429 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 B4GALNT2Q8NHY0 566 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 CEP76Q8TAP6 659 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 HTRA1Q92743 480 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 ATOH1Q92858 354 aaPredicted RBP3.85□□□□□ -1.79
COPA-204ENST00000481522 TBATAQ96M53 351 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 CAMK1GQ96NX5 476 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 EYA3Q99504 573 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 CLSTN3Q9BQT9 956 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 POLR3GLQ9BT43 218 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 PHF7Q9BWX1 381 aaPredicted RBP3.85□□□□□ -1.79
COPA-204ENST00000481522 DCLK3Q9C098 648 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 KLHL31Q9H511 634 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 GGA3Q9NZ52 723 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 PDP2Q9P2J9 529 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 TBX20Q9UMR3 447 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 PCDHA7Q9UN72 937 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 HFM1A2PYH4 1435 aa3.85□□□□□ -1.79
COPA-204ENST00000481522 YTHDC2Q9H6S0 1430 aaKnown RBP3.85□□□□□ -1.79
COPA-204ENST00000481522 LOC400499M0QZD8 3231 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 BRCA1P38398 1863 aaKnown RBP3.84□□□□□ -1.79
COPA-204ENST00000481522 CCDC88AQ3V6T2 1871 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 GOLGA6L10A0A0M3HER8 536 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 FAM157AC9JC47 383 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 MS4A18H0YCH9 400 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 HSPB6O14558 160 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 SPRY3O43610 288 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 CEP104O60308 925 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 HNRNPA1P09651 372 aaKnown RBP eCLIP3.84□□□□□ -1.79
COPA-204ENST00000481522 PPP3CCP48454 512 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 BLKP51451 505 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 ARSFP54793 590 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 CDH12P55289 794 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 EGR4Q05215 589 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 HYAL1Q12794 435 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 DUSP6Q16828 381 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 FBXO43Q4G163 708 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 TMEM71Q6P5X7 295 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 TRIM74Q86UV6 250 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 TRIM73Q86UV7 250 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 MON1AQ86VX9 555 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 CHD1LQ86WJ1 897 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 TMTC1Q8IUR5 882 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 ESX1Q8N693 406 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 SLC35F5Q8WV83 523 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 RUFY2Q8WXA3 655 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 URB1-AS1Q96HZ7 61 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 ZNF479Q96JC4 524 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 APOLD1Q96LR9 279 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 CDX2Q99626 313 aaPredicted RBP3.84□□□□□ -1.79
COPA-204ENST00000481522 INTS2Q9H0H0 1204 aaKnown RBP3.84□□□□□ -1.79
COPA-204ENST00000481522 SLC32A1Q9H598 525 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 WASH6PQ9NQA3 447 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 PGAP2Q9UHJ9 254 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 CRYL1Q9Y2S2 319 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 SRPRBQ9Y5M8 271 aaKnown RBP3.84□□□□□ -1.79
COPA-204ENST00000481522 PTGDR2Q9Y5Y4 395 aa3.84□□□□□ -1.79
COPA-204ENST00000481522 PXDNQ92626 1479 aa3.84□□□□□ -1.8
COPA-204ENST00000481522 TIAM2Q8IVF5 1701 aa3.84□□□□□ -1.8
COPA-204ENST00000481522 ZFHX3Q15911 3703 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.83□□□□□ -1.8
COPA-204ENST00000481522 ARHGAP10A1A4S6 786 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 BECN2A8MW95 431 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 EYA2O00167 538 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 VWA5AO00534 786 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 RGS14O43566 566 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 LIASO43766 372 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 TGFB3P10600 412 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 HOXA11P31270 313 aaPredicted RBP3.83□□□□□ -1.8
COPA-204ENST00000481522 ZXDBP98169 803 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 ALFQ53S48 1182 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 FSCBQ5H9T9 825 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 FNBP1LQ5T0N5 605 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 SLC22A25Q6T423 547 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 PRSS45Q7RTY3 260 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 ZMIZ2Q8NF64 920 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 OR4N2Q8NGD1 307 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 RASSF8Q8NHQ8 419 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 TMEM163Q8TC26 289 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 GDPD5Q8WTR4 605 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 TBC1D22AQ8WUA7 517 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 HVCN1Q96D96 273 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 ELP4Q96EB1 424 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 LHPPQ9H008 270 aa3.83□□□□□ -1.8
COPA-204ENST00000481522 WDR6Q9NNW5 1121 aaKnown RBP3.83□□□□□ -1.8
COPA-204ENST00000481522 BEX4Q9NWD9 120 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms