RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 TDP2O95551 362 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 MT-ND3P03897 115 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 HBQ1P09105 142 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 POLR2IP36954 125 aaKnown RBP10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 GZMKP49863 264 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 C21orf58P58505 322 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 CSNK2BP67870 215 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 ZNF91Q05481 1191 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 TRIM25Q14258 630 aaKnown RBP10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 DMC1Q14565 340 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 ZNF169Q14929 603 aaPredicted RBP10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 FASTKD3Q14CZ7 662 aaKnown RBP10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 GRIK4Q16099 956 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 RUNDC3AQ59EK9 446 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 ZC3H12BQ5HYM0 836 aaKnown RBP10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 HYIQ5T013 277 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 ZNF790Q6PG37 636 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 MAPKAPK5Q8IW41 473 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 SLC44A2Q8IWA5 706 aaPredicted RBP10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 THNSL1Q8IYQ7 743 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 UBR7Q8N806 425 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 TXNDC5Q8NBS9 432 aaKnown RBP10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 OR7A2PQ8NGA2 310 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 LNX1Q8TBB1 728 aaPredicted RBP10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 DYNC2LI1Q8TCX1 351 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 SHISA4Q96DD7 197 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 MROH8Q9H579 483 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 RANBP3Q9H6Z4 567 aaPredicted RBP10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 CATSPERBQ9H7T0 1116 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 TAS2R9Q9NYW1 312 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 IFT80Q9P2H3 777 aaPredicted RBP10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 MFHAS1Q9Y4C4 1052 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 LAMB1P07942 1786 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 USP54Q70EL1 1684 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 LRP5O75197 1615 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 NEURL1BA8MQ27 555 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 NT5C1B-RDH14C9J2C7 533 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 GPR25O00155 361 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 TSHRP16473 764 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 CKMT2P17540 419 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 ATP2B4P23634 1241 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 SLC7A1P30825 629 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 ACSL1P33121 698 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 YWHAEP62258 255 aaKnown RBP10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 FOXK2Q01167 660 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 MS4A2Q01362 244 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 RHDQ02161 417 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 MTX3Q5HYI7 312 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 PDE12Q6L8Q7 609 aaKnown RBP10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 PMF1Q6P1K2 205 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 PGAM4Q8N0Y7 254 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 EFCAB3Q8N7B9 438 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 ZBTB38Q8NAP3 1195 aaPredicted RBP10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 KYQ8NBH2 561 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 OR13J1Q8NGT2 312 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 SETD6Q8TBK2 473 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 SHARPINQ9H0F6 387 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 SEMA6AQ9H2E6 1030 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 ACSS3Q9H6R3 686 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 ATP13A1Q9HD20 1204 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 ZNF224Q9NZL3 707 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 MAGED2Q9UNF1 606 aaPredicted RBP10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 COG5Q9UP83 839 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 USP22Q9UPT9 525 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 SNX5Q9Y5X3 404 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 A3GALT2U3KPV4 340 aa10.39□□□□□ -0.75
PRPF4B-206ENST00000481109 A0A1B0GVM2 712 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 LOC390937A0A1W2PQ73 354 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 PRSS47A8MTI9 375 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 LOC110117498-PIK3R3F6TDL0 507 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 WRBO00258 174 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 TOR1BO14657 336 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 TBX1O43435 398 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 RHOBTB1O94844 696 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 TGM6O95932 706 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 RBP1P09455 135 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 POU3F3P20264 500 aaPredicted RBP10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 ZP3P21754 424 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 MCM7P33993 719 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 MARCKSL1P49006 195 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 RBP5P82980 135 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 MPP1Q00013 466 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 ADAM15Q13444 863 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 EFR3AQ14156 821 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 GCKRQ14397 625 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 GEN1Q17RS7 908 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 ZNF484Q5JVG2 852 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 CATSPEREQ5SY80 951 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 PDPK2PQ6A1A2 396 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 NSMFQ6X4W1 530 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 LIPIQ6XZB0 460 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 USP51Q70EK9 711 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 CHSY3Q70JA7 882 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 UTS2BQ765I0 119 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 MILR1Q7Z6M3 343 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 C12orf40Q86WS4 652 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 ZNF366Q8N895 744 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 C3orf58Q8NDZ4 430 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 SLC13A3Q8WWT9 602 aa10.38□□□□□ -0.75
PRPF4B-206ENST00000481109 APBB2Q92870 758 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms