RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 PCDHGB7Q9Y5F8 929 aa6.63□□□□□ -1.35
LRCH3-216ENST00000481048 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.63□□□□□ -1.35
LRCH3-216ENST00000481048 FREM2Q5SZK8 3169 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 A0A087WV48 116 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 TBC1D3DA0A087WVF3 549 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 TBC1D3IA0A087WXS9 549 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 TBC1D3EA0A087X179 549 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 TBC1D3KA0A087X1G2 549 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 A0A1W2PR77 199 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 GTPBP10A4D1E9 387 aaKnown RBP6.62□□□□□ -1.35
LRCH3-216ENST00000481048 TBC1D3FA6NER0 549 aaPredicted RBP6.62□□□□□ -1.35
LRCH3-216ENST00000481048 TRABD2BA6NFA1 517 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 FAM47DPA6NHR8 397 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 TTC34A8MYJ7 566 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 TBC1D3LB9A6J9 549 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 TLR4O00206 839 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 THAP12O43422 761 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 RNASEH2AO75792 299 aaKnown RBP6.62□□□□□ -1.35
LRCH3-216ENST00000481048 LETM1O95202 739 aaPredicted RBP6.62□□□□□ -1.35
LRCH3-216ENST00000481048 ITGAVP06756 1048 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 TBC1D3HP0C7X1 549 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 HNF1BP35680 557 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 PAK1Q13153 545 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 MORC3Q14149 939 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 ACAP1Q15027 740 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 C5orf22Q49AR2 442 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 TBC1D3GQ6DHY5 549 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 TBC1D3CQ6IPX1 549 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 KLHL10Q6JEL2 608 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 NEK5Q6P3R8 708 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 CCDC81Q6ZN84 652 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 PRPF39Q86UA1 669 aaKnown RBP6.62□□□□□ -1.35
LRCH3-216ENST00000481048 TAC4Q86UU9 113 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 CHSY1Q86X52 802 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 ARHGEF19Q8IW93 802 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 TBC1D3Q8IZP1 549 aaPredicted RBP6.62□□□□□ -1.35
LRCH3-216ENST00000481048 APCDD1Q8J025 514 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 CFAP52Q8N1V2 620 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 STK40Q8N2I9 435 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 OR14C36Q8NHC7 312 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 ADAMTS17Q8TE56 1095 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 SAP25Q8TEE9 199 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 FRS2Q8WU20 508 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 ERCC4Q92889 916 aaPredicted RBP6.62□□□□□ -1.35
LRCH3-216ENST00000481048 KAT5Q92993 513 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 SLC2A13Q96QE2 648 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 PRMT1Q99873 361 aaKnown RBP6.62□□□□□ -1.35
LRCH3-216ENST00000481048 INTS2Q9H0H0 1204 aaKnown RBP6.62□□□□□ -1.35
LRCH3-216ENST00000481048 KLHL25Q9H0H3 589 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 AASDHPPTQ9NRN7 309 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 RALYQ9UKM9 306 aaKnown RBP6.62□□□□□ -1.35
LRCH3-216ENST00000481048 SLCO1B1Q9Y6L6 691 aa6.62□□□□□ -1.35
LRCH3-216ENST00000481048 AHCTF1Q8WYP5 2266 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 KIF26BQ2KJY2 2108 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 ARHGEF17Q96PE2 2063 aaPredicted RBP6.61□□□□□ -1.35
LRCH3-216ENST00000481048 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.61□□□□□ -1.35
LRCH3-216ENST00000481048 E5RJQ4 531 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 C1QTNF3-AMACRE9PGA6 284 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 KCNK3O14649 394 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 MCF2LO15068 1137 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 HSF2BPO75031 334 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 CLDN11O75508 207 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 PPM1BO75688 479 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 MOCS2O96007 188 aaPredicted RBP6.61□□□□□ -1.35
LRCH3-216ENST00000481048 F9P00740 461 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 IL1BP01584 269 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 WNT1P04628 370 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 KRT5P13647 590 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 JUPP14923 745 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 PAMP19021 973 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 TNFRSF1AP19438 455 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 ADPRHP54922 357 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 BPIFB4P59827 614 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 KRT83P78385 493 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 CYP4F3Q08477 520 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 ZNF177Q13360 481 aaPredicted RBP6.61□□□□□ -1.35
LRCH3-216ENST00000481048 COL9A2Q14055 689 aaPredicted RBP6.61□□□□□ -1.35
LRCH3-216ENST00000481048 KCNJ12Q14500 433 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 STAT4Q14765 748 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 KCNT1Q5JUK3 1230 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 RAP1GAP2Q684P5 730 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 ISM2Q6H9L7 571 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 NAPEPLDQ6IQ20 393 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 GBP6Q6ZN66 633 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 MMS22LQ6ZRQ5 1243 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 C11orf57Q6ZUT1 292 aaPredicted RBP6.61□□□□□ -1.35
LRCH3-216ENST00000481048 SLC26A9Q7LBE3 791 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 TRIM69Q86WT6 500 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 ZDHHC17Q8IUH5 632 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 CCAR2Q8N163 923 aaKnown RBP6.61□□□□□ -1.35
LRCH3-216ENST00000481048 AADATQ8N5Z0 425 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 LINC00482Q8N8I6 264 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 C1orf131Q8NDD1 294 aaKnown RBP6.61□□□□□ -1.35
LRCH3-216ENST00000481048 ZNF397Q8NF99 534 aaPredicted RBP6.61□□□□□ -1.35
LRCH3-216ENST00000481048 MDM1Q8TC05 714 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 OR8D1Q8WZ84 308 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 MYEOVQ96EZ4 313 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 ALG14Q96F25 216 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 PGAP3Q96FM1 320 aaPredicted RBP6.61□□□□□ -1.35
LRCH3-216ENST00000481048 SERAC1Q96JX3 654 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms