RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 FUNDC1Q8IVP5 155 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 OR13J1Q8NGT2 312 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 ANGPTL6Q8NI99 470 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 PIWIL1Q96J94 861 aaKnown RBP10.68□□□□□ -0.7
SIK3-210ENST00000480468 TAAR1Q96RJ0 339 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 IL12RB2Q99665 862 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 MRPL57Q9BQC6 102 aaKnown RBP10.68□□□□□ -0.7
SIK3-210ENST00000480468 PDCD2LQ9BRP1 358 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 RNF38Q9H0F5 515 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 NOL6Q9H6R4 1146 aaKnown RBP10.68□□□□□ -0.7
SIK3-210ENST00000480468 PCDH12Q9NPG4 1184 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 CMTM6Q9NX76 183 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 MAP10Q9P2G4 905 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 RCOR3Q9P2K3 495 aaPredicted RBP10.68□□□□□ -0.7
SIK3-210ENST00000480468 VANGL2Q9ULK5 521 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 SATB2Q9UPW6 733 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 PDE10AQ9Y233 779 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 ACOT9Q9Y305 439 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 SNX5Q9Y5X3 404 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 TTC34A8MYJ7 566 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 EVPLLA8MZ36 301 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 OGTO15294 1046 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 PRSS23O95084 383 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 KRT6AP02538 564 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 KRT6BP04259 564 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 KRT19P08727 400 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 THRBP10828 461 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 CDH1P12830 882 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 PCMT1P22061 227 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 GPX3P22352 226 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 SLC6A2P23975 617 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 RAP1GAPP47736 663 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 GLRBP48167 497 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 ALDH7A1P49419 539 aaKnown RBP10.68□□□□□ -0.7
SIK3-210ENST00000480468 GP2P55259 537 aaKnown RBP10.68□□□□□ -0.7
SIK3-210ENST00000480468 C1QTNF8P60827 252 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 FKBP1AP62942 108 aaKnown RBP10.68□□□□□ -0.7
SIK3-210ENST00000480468 PRPSAP1Q14558 356 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 USP10Q14694 798 aaKnown RBP10.68□□□□□ -0.7
SIK3-210ENST00000480468 SMAD1Q15797 465 aaKnown RBP10.68□□□□□ -0.7
SIK3-210ENST00000480468 DPY19L1Q2PZI1 675 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 SWSAP1Q6NVH7 229 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 PMF1Q6P1K2 205 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 LARP4Q71RC2 724 aaKnown RBP eCLIP10.68□□□□□ -0.7
SIK3-210ENST00000480468 ADCK1Q86TW2 530 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 BPHLQ86WA6 291 aaPredicted RBP10.68□□□□□ -0.7
SIK3-210ENST00000480468 LYSMD2Q8IV50 215 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 LGI2Q8N0V4 545 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 DYNC2LI1Q8TCX1 351 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 BPIFB1Q8TDL5 484 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 CCDC126Q96EE4 140 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 NGLY1Q96IV0 654 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 TWNKQ96RR1 684 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 CYP2S1Q96SQ9 504 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 BTBD2Q9BX70 525 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 EMILIN2Q9BXX0 1053 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 OSBPL2Q9H1P3 480 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 CYP3A43Q9HB55 503 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 CASS4Q9NQ75 786 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 PAK1IP1Q9NWT1 392 aaPredicted RBP10.68□□□□□ -0.7
SIK3-210ENST00000480468 EGFL7Q9UHF1 273 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 CPSF3Q9UKF6 684 aaKnown RBP10.68□□□□□ -0.7
SIK3-210ENST00000480468 USP3Q9Y6I4 520 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 TLL2Q9Y6L7 1015 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 PMF1-BGLAPU3KQ54 211 aa10.68□□□□□ -0.7
SIK3-210ENST00000480468 ZNF99A8MXY4 864 aaPredicted RBP10.67□□□□□ -0.7
SIK3-210ENST00000480468 TAF4O00268 1085 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 TOR1BO14657 336 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 INPP4BO15327 924 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 B4GALT4O60513 344 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 AP2A1O95782 977 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 CHRNA1P02708 482 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 ALPLP05186 524 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 MYCLP12524 364 aaPredicted RBP10.67□□□□□ -0.7
SIK3-210ENST00000480468 PRKCAP17252 672 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 ABCG1P45844 678 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 NKX2-5P52952 324 aaPredicted RBP10.67□□□□□ -0.7
SIK3-210ENST00000480468 GNG2P59768 71 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 COPZ1P61923 177 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 TFAMQ00059 246 aaKnown RBP10.67□□□□□ -0.7
SIK3-210ENST00000480468 VAC14Q08AM6 782 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 IFRD2Q12894 506 aaPredicted RBP10.67□□□□□ -0.7
SIK3-210ENST00000480468 KRR1Q13601 381 aaKnown RBP10.67□□□□□ -0.7
SIK3-210ENST00000480468 PPP1R3AQ16821 1122 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 TRIM71Q2Q1W2 868 aaKnown RBP10.67□□□□□ -0.7
SIK3-210ENST00000480468 MTERF2Q49AM1 385 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 LCLAT1Q6UWP7 414 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 SVOPQ8N4V2 548 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 ASCC1Q8N9N2 400 aaKnown RBP10.67□□□□□ -0.7
SIK3-210ENST00000480468 TXNDC5Q8NBS9 432 aaKnown RBP10.67□□□□□ -0.7
SIK3-210ENST00000480468 CHDHQ8NE62 594 aaPredicted RBP10.67□□□□□ -0.7
SIK3-210ENST00000480468 OR52K1Q8NGK4 314 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 OR9I1Q8NGQ6 314 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 TMEM143Q96AN5 459 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 P2RY11Q96G91 374 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 LGMNQ99538 433 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 SLC30A3Q99726 388 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 TRIM54Q9BYV2 358 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 ADNPQ9H2P0 1102 aa10.67□□□□□ -0.7
SIK3-210ENST00000480468 SPC25Q9HBM1 224 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms