RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 MGAT5Q09328 741 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 RASA2Q15283 850 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 UGP2Q16851 508 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 LONRF1Q17RB8 773 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 EOGTQ5NDL2 527 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 ZNF776Q68DI1 518 aaPredicted RBP12.62□□□□□ -0.39
SIK3-209ENST00000480222 ERAP2Q6P179 960 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 TDRPQ86YL5 185 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 LMNTD2Q8IXW0 634 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 TTC30BQ8N4P2 665 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 GOLGA6L1Q8N7Z2 621 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 OR2T3Q8NH03 318 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 NECAB3Q96P71 396 aaPredicted RBP12.62□□□□□ -0.39
SIK3-209ENST00000480222 FAM167BQ9BTA0 163 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 RSPH9Q9H1X1 276 aaPredicted RBP12.62□□□□□ -0.39
SIK3-209ENST00000480222 POLR3BQ9NW08 1133 aaPredicted RBP12.62□□□□□ -0.39
SIK3-209ENST00000480222 NSMCE4AQ9NXX6 385 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 SLC24A2Q9UI40 661 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 C1orf232A0A0U1RR37 186 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 C16orf96A6NNT2 1141 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 RASGRF2O14827 1237 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 SLC7A4O43246 635 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 OPA1O60313 960 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 CDH16O75309 829 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 RPP40O75818 363 aaKnown RBP12.61□□□□□ -0.39
SIK3-209ENST00000480222 KLF8O95600 359 aaPredicted RBP12.61□□□□□ -0.39
SIK3-209ENST00000480222 IL1BP01584 269 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 C1QAP02745 245 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 ALPIP09923 528 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 PIRTP0C851 137 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 C7P10643 843 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 CTPS1P17812 591 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 SLC8A1P32418 973 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 HNF1BP35680 557 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 HMGCLP35914 325 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 PSMD8P48556 350 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 NEK3P51956 506 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 FAM193AP78312 1265 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 CCDC15Q0P6D6 951 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 ELP6Q0PNE2 266 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 ILF2Q12905 390 aaKnown RBP12.61□□□□□ -0.39
SIK3-209ENST00000480222 KRT71Q3SY84 523 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 KBTBD12Q3ZCT8 623 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 C2orf27AQ580R0 203 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 CEP85LQ5SZL2 805 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 IER5LQ5T953 404 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 EMC10Q5UCC4 262 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 TRMT10BQ6PF06 316 aaKnown RBP12.61□□□□□ -0.39
SIK3-209ENST00000480222 MARK2Q7KZI7 788 aaKnown RBP12.61□□□□□ -0.39
SIK3-209ENST00000480222 DPPA4Q7L190 304 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 PARS2Q7L3T8 475 aaKnown RBP12.61□□□□□ -0.39
SIK3-209ENST00000480222 KCNMB4Q86W47 210 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 RASSF3Q86WH2 238 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 LRRC6Q86X45 466 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 CNTN4Q8IWV2 1026 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 RAVER1Q8IY67 606 aaKnown RBP12.61□□□□□ -0.39
SIK3-209ENST00000480222 TXNDC5Q8NBS9 432 aaKnown RBP12.61□□□□□ -0.39
SIK3-209ENST00000480222 MDGA1Q8NFP4 955 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 OR13J1Q8NGT2 312 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 OR2W6PQ8NHA6 318 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 UHMK1Q8TAS1 419 aaKnown RBP12.61□□□□□ -0.39
SIK3-209ENST00000480222 CALML6Q8TD86 181 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 SCG3Q8WXD2 468 aaKnown RBP12.61□□□□□ -0.39
SIK3-209ENST00000480222 RAB7BQ96AH8 199 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 FCRL3Q96P31 734 aaPredicted RBP12.61□□□□□ -0.39
SIK3-209ENST00000480222 FAM129BQ96TA1 746 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 TRIM56Q9BRZ2 755 aaKnown RBP12.61□□□□□ -0.39
SIK3-209ENST00000480222 HDAC8Q9BY41 377 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 GPR63Q9BZJ6 419 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 ZFYVE1Q9HBF4 777 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 MED4Q9NPJ6 270 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 C20orf96Q9NUD7 363 aaPredicted RBP12.61□□□□□ -0.39
SIK3-209ENST00000480222 NLE1Q9NVX2 485 aaPredicted RBP12.61□□□□□ -0.39
SIK3-209ENST00000480222 ZFATQ9P243 1243 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 VPS18Q9P253 973 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 PSMC3IPQ9P2W1 217 aaPredicted RBP12.61□□□□□ -0.39
SIK3-209ENST00000480222 FBXL21Q9UKT6 434 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 CA14Q9ULX7 337 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 SCML1Q9UN30 329 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 PKP3Q9Y446 797 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 ARL5AQ9Y689 179 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 IKBKGQ9Y6K9 419 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 F5P12259 2224 aa12.61□□□□□ -0.39
SIK3-209ENST00000480222 NPIPB15A6NHN6 443 aaPredicted RBP12.6□□□□□ -0.39
SIK3-209ENST00000480222 H7C0S8 307 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 PSMD11O00231 422 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 STX7O15400 261 aaKnown RBP12.6□□□□□ -0.39
SIK3-209ENST00000480222 ADAM23O75077 832 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 MYZAPP0CAP1 466 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 BMP1P13497 986 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 C5AR1P21730 350 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 VIPR1P32241 457 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 MMP12P39900 470 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 ABL2P42684 1182 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 ARCN1P48444 511 aaKnown RBP12.6□□□□□ -0.39
SIK3-209ENST00000480222 STARD6P59095 220 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 PRAMEP78395 509 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 SATB1Q01826 763 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 ZBTB16Q05516 673 aa12.6□□□□□ -0.39
SIK3-209ENST00000480222 CST6Q15828 149 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms