RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 ACAP2Q15057 778 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 TAF1CQ15572 869 aaPredicted RBP6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 PTPRNQ16849 979 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 SLC25A52Q3SY17 297 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 ACSBG2Q5FVE4 666 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 GNASQ5JWF2 1037 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 GLYATQ6IB77 296 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 TMPRSS11AQ6ZMR5 421 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 TIFABQ6ZNK6 161 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 SYTL1Q8IYJ3 562 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 HS6ST3Q8IZP7 471 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 CACTIN-AS1Q8N1I8 211 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 DRAXINQ8NBI3 349 aaPredicted RBP6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 TRPV3Q8NET8 790 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 CAPSLQ8WWF8 208 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 NELL1Q92832 810 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 COPS8Q99627 209 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 FDXACB1Q9BRP7 624 aaPredicted RBP6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 PIDD1Q9HB75 910 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 CALML5Q9NZT1 146 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 ENTPD4Q9Y227 616 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 MST1RQ04912 1400 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 RNF225M0QZC1 329 aaPredicted RBP6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 LRCH4O75427 683 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 NOL4O94818 638 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 MICAL2O94851 1124 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 ERP29P30040 261 aaKnown RBP6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 WNT3AP56704 352 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 SRSF11Q05519 484 aaKnown RBP6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 PLD1Q13393 1074 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 SEMA5AQ13591 1074 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 RBM48Q5RL73 367 aaKnown RBP6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 PAMR1Q6UXH9 720 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 MTSS1LQ765P7 747 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 BEND7Q8N7W2 519 aaPredicted RBP6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 CMASQ8NFW8 434 aaPredicted RBP6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 C7orf43Q8WVR3 580 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 PEX13Q92968 403 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 CPB2Q96IY4 423 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 PPP1R16BQ96T49 567 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 EPB41L1Q9H4G0 881 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 SCUBE2Q9NQ36 999 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 RABL2AQ9UBK7 228 aaPredicted RBP6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 CNOT11Q9UKZ1 510 aaKnown RBP6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 RABL2BQ9UNT1 228 aa6.17□□□□□ -1.42
PRPF4B-205ENST00000480058 TLX1P31314 330 aaPredicted RBP6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 GSTM5P46439 218 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 HCAR3P49019 387 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 SLC18A2Q05940 514 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 OLFML1Q6UWY5 402 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 VSTM1Q6UX27 236 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 ZYG11AQ6WRX3 759 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 CYP2U1Q7Z449 544 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 KDELC2Q7Z4H8 507 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 MON1AQ86VX9 555 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 MIB1Q86YT6 1006 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 PLD5Q8N7P1 536 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 OR52K1Q8NGK4 314 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 SLC2A14Q8TDB8 520 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 ACSF2Q96CM8 615 aaPredicted RBP6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 P2RY11Q96G91 374 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 HIPK3Q9H422 1215 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 ANKRA2Q9H9E1 313 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 ZFYVE28Q9HCC9 887 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 ELOVL7A1L3X0 281 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 NBNO60934 754 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 FTH1P02794 183 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 ESR1P03372 595 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 CKMP06732 381 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 DBTP11182 482 aaKnown RBP6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 PCNAP12004 261 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 ITIH1P19827 911 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 BCL2L1Q07817 233 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 QPCTQ16769 361 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 CTXN3Q4LDR2 81 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 DSELQ8IZU8 1212 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 C10orf82Q8WW14 230 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 CAMK1GQ96NX5 476 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 ULBP1Q9BZM6 244 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 SYNDIG1Q9H7V2 258 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 CAB39LQ9H9S4 337 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 PAK6Q9NQU5 681 aaPredicted RBP6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 SLC30A4O14863 429 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 PRKD3O94806 890 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 CSPG5O95196 566 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 PARNO95453 639 aaKnown RBP6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 FYNP06241 537 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 RAP2AP10114 183 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 DARSP14868 501 aaKnown RBP6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 HPGDP15428 266 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 PTPN1P18031 435 aaKnown RBP6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 CCNCP24863 283 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 SLC16A1P53985 500 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 PFKFB4Q16877 469 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 ARMC8Q8IUR7 673 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 RBM12BQ8IXT5 1001 aaKnown RBP6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 CBR4Q8N4T8 237 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 UBR7Q8N806 425 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 UBASH3BQ8TF42 649 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 PIK3R5Q8WYR1 880 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms