RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 ZNF30P17039 623 aa20.54■□□□□ 0.88
VARS-224ENST00000479051 NFKB1P19838 968 aa20.54■□□□□ 0.88
VARS-224ENST00000479051 IHHQ14623 411 aa20.54■□□□□ 0.88
VARS-224ENST00000479051 SUZ12Q15022 739 aaKnown RBP20.54■□□□□ 0.88
VARS-224ENST00000479051 PCSK7Q16549 785 aa20.54■□□□□ 0.88
VARS-224ENST00000479051 TP53I13Q8NBR0 393 aaPredicted RBP20.54■□□□□ 0.88
VARS-224ENST00000479051 OR13H1Q8NG92 308 aa20.54■□□□□ 0.88
VARS-224ENST00000479051 MAIP1Q8WWC4 291 aa20.54■□□□□ 0.88
VARS-224ENST00000479051 BMFQ96LC9 184 aa20.54■□□□□ 0.88
VARS-224ENST00000479051 PPP1R2P1Q96PQ5 205 aa20.54■□□□□ 0.88
VARS-224ENST00000479051 FCRL5Q96RD9 977 aa20.54■□□□□ 0.88
VARS-224ENST00000479051 MLPHQ9BV36 600 aaPredicted RBP20.54■□□□□ 0.88
VARS-224ENST00000479051 TLR10Q9BXR5 811 aa20.54■□□□□ 0.88
VARS-224ENST00000479051 TM7SF3Q9NS93 570 aa20.54■□□□□ 0.88
VARS-224ENST00000479051 TRMT1Q9NXH9 659 aaKnown RBP20.54■□□□□ 0.88
VARS-224ENST00000479051 FNDC3AQ9Y2H6 1198 aaKnown RBP20.54■□□□□ 0.88
VARS-224ENST00000479051 CEP250Q9BV73 2442 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 POM121BA6NF01 834 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 CAPN8A6NHC0 703 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 PMPCBO75439 489 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 RECQL5O94762 991 aaPredicted RBP20.53■□□□□ 0.88
VARS-224ENST00000479051 MT-CYBP00156 380 aaPredicted RBP20.53■□□□□ 0.88
VARS-224ENST00000479051 PRLP01236 227 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 ALPIP09923 528 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 CD68P34810 354 aaPredicted RBP20.53■□□□□ 0.88
VARS-224ENST00000479051 HNF1BP35680 557 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 YPEL5P62699 121 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 CDK18Q07002 472 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 PTK2BQ14289 1009 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 PRPSAP1Q14558 356 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 IRF4Q15306 451 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 CNGA3Q16281 694 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 ZNF569Q5MCW4 686 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 DENND2CQ68D51 928 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 SPATA22Q8NHS9 363 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 TADA1Q96BN2 335 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 GBA3Q9H227 469 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 C10orf88Q9H8K7 445 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 IL21RQ9HBE5 538 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 PCDHGB2Q9Y5G2 931 aa20.53■□□□□ 0.88
VARS-224ENST00000479051 LAMA1P25391 3075 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 A0A1B0GTQ1 180 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 ANKRD66B4E2M5 251 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 ANXA9O76027 345 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 IGFALSP35858 605 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 THOP1P52888 689 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 GEMP55040 296 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 MPP3Q13368 585 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 QPCTQ16769 361 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 WSCD2Q2TBF2 565 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 INAVAQ3KP66 663 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 ANKRD20A2Q5SQ80 823 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 ANKRD20A1Q5TYW2 823 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 ANKRD20A3Q5VUR7 823 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 LRRC66Q68CR7 880 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 SPATS2Q86XZ4 545 aaKnown RBP20.52■□□□□ 0.88
VARS-224ENST00000479051 LRRC45Q96CN5 670 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 NUS1Q96E22 293 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 SPATA13Q96N96 652 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 LYSMD1Q96S90 227 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 SRPK1Q96SB4 655 aaKnown RBP20.52■□□□□ 0.88
VARS-224ENST00000479051 SLC32A1Q9H598 525 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 UBP1Q9NZI7 540 aa20.52■□□□□ 0.88
VARS-224ENST00000479051 R3HDM2Q9Y2K5 976 aaKnown RBP20.52■□□□□ 0.88
VARS-224ENST00000479051 TCRBV7S2A1N4TA0A589 114 aa20.51■□□□□ 0.87
VARS-224ENST00000479051 NDST3O95803 873 aa20.51■□□□□ 0.87
VARS-224ENST00000479051 PCCBP05166 539 aa20.51■□□□□ 0.87
VARS-224ENST00000479051 LHCGRP22888 699 aa20.51■□□□□ 0.87
VARS-224ENST00000479051 WNT3AP56704 352 aa20.51■□□□□ 0.87
VARS-224ENST00000479051 PFN3P60673 137 aa20.51■□□□□ 0.87
VARS-224ENST00000479051 MTM1Q13496 603 aa20.51■□□□□ 0.87
VARS-224ENST00000479051 GALNT3Q14435 633 aa20.51■□□□□ 0.87
VARS-224ENST00000479051 FAM182AQ5T1J6 154 aa20.51■□□□□ 0.87
VARS-224ENST00000479051 CRTC1Q6UUV9 634 aa20.51■□□□□ 0.87
VARS-224ENST00000479051 KDELC2Q7Z4H8 507 aa20.51■□□□□ 0.87
VARS-224ENST00000479051 TSPAN33Q86UF1 283 aa20.51■□□□□ 0.87
VARS-224ENST00000479051 ATL2Q8NHH9 583 aa20.51■□□□□ 0.87
VARS-224ENST00000479051 SLC35B2Q8TB61 432 aa20.51■□□□□ 0.87
VARS-224ENST00000479051 CCHCR1Q8TD31 782 aa20.51■□□□□ 0.87
VARS-224ENST00000479051 COQ10AQ96MF6 247 aa20.51■□□□□ 0.87
VARS-224ENST00000479051 FSD1LQ9BXM9 530 aa20.51■□□□□ 0.87
VARS-224ENST00000479051 USP29Q9HBJ7 922 aa20.51■□□□□ 0.87
VARS-224ENST00000479051 MBNL1Q9NR56 388 aaKnown RBP20.51■□□□□ 0.87
VARS-224ENST00000479051 ZKSCAN5Q9Y2L8 839 aa20.51■□□□□ 0.87
VARS-224ENST00000479051 AAR2Q9Y312 384 aaKnown RBP20.51■□□□□ 0.87
VARS-224ENST00000479051 DMXL1Q9Y485 3027 aa20.5■□□□□ 0.87
VARS-224ENST00000479051 C1orf232A0A0U1RR37 186 aa20.5■□□□□ 0.87
VARS-224ENST00000479051 GOLGA6CA6NDK9 693 aa20.5■□□□□ 0.87
VARS-224ENST00000479051 GOLGA6BA6NDN3 693 aa20.5■□□□□ 0.87
VARS-224ENST00000479051 FLRT2O43155 660 aa20.5■□□□□ 0.87
VARS-224ENST00000479051 CEP104O60308 925 aa20.5■□□□□ 0.87
VARS-224ENST00000479051 PCDHGA12O60330 932 aa20.5■□□□□ 0.87
VARS-224ENST00000479051 EPOP01588 193 aa20.5■□□□□ 0.87
VARS-224ENST00000479051 GOLGA6DP0CG33 693 aa20.5■□□□□ 0.87
VARS-224ENST00000479051 RXRGP48443 463 aa20.5■□□□□ 0.87
VARS-224ENST00000479051 PDE1CQ14123 709 aaPredicted RBP20.5■□□□□ 0.87
VARS-224ENST00000479051 PRAMEF14Q5SWL7 426 aa20.5■□□□□ 0.87
VARS-224ENST00000479051 ARHGEF18Q6ZSZ5 1173 aa20.5■□□□□ 0.87
VARS-224ENST00000479051 HSD11B1LQ7Z5J1 315 aa20.5■□□□□ 0.87
VARS-224ENST00000479051 PARGQ86W56 976 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms