RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 TSPAN33Q86UF1 283 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 NDUFAF2Q8N183 169 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 FAM71DQ8N9W8 422 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 TMEM145Q8NBT3 493 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 OR13H1Q8NG92 308 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 CCDC110Q8TBZ0 833 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 NETO1Q8TDF5 533 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 PIH1D2Q8WWB5 315 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 C1orf54Q8WWF1 131 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 SKA1Q96BD8 255 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 IFT43Q96FT9 208 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 VAT1Q99536 393 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 C1QTNF7Q9BXJ2 289 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 C1QTNF2Q9BXJ5 285 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 GAREM1Q9H706 876 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 IL21RQ9HBE5 538 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 GOLGA6AQ9NYA3 693 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 DNPEPQ9ULA0 475 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 JRKLQ9Y4A0 524 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 LRP4O75096 1905 aa6.92□□□□□ -1.3
BRCA1-215ENST00000478531 A0A0J9YYE9 177 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 A0A1W2PR77 199 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 CAPN8A6NHC0 703 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 A6NNZ2 444 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 TLR4O00206 839 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 CDX4O14627 284 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-215ENST00000478531 FPGTO14772 594 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 VILLO15195 856 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 FZD6O60353 706 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 OPHN1O60890 802 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 TRBC1P01850 177 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 PIRTP0C851 137 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 LHCGRP22888 699 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 PSMB4P28070 264 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 HNF1BP35680 557 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 IGFALSP35858 605 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 GDF10P55107 478 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 ARHGAP8P85298 464 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 LRRC14Q15048 493 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 LONRF2Q1L5Z9 754 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 ANKRD20A2Q5SQ80 823 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 PRAMEF14Q5SWL7 426 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 ANKRD20A1Q5TYW2 823 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 ANKRD20A3Q5VUR7 823 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 LRRC66Q68CR7 880 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 ITPRIPL1Q6GPH6 555 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 IL27RAQ6UWB1 636 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 LIPIQ6XZB0 460 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 ARHGEF18Q6ZSZ5 1173 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 ZSCAN30Q86W11 494 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 C17orf53Q8N3J3 647 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-215ENST00000478531 TAB3Q8N5C8 712 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-215ENST00000478531 IPMKQ8NFU5 416 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 KLHDC7BQ96G42 594 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 OXNAD1Q96HP4 312 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-215ENST00000478531 FSD1LQ9BXM9 530 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 ADGRE3Q9BY15 652 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 ZDHHC5Q9C0B5 715 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 GBA3Q9H227 469 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 GDF3Q9NR23 364 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 MBNL1Q9NR56 388 aaKnown RBP6.91□□□□□ -1.3
BRCA1-215ENST00000478531 FAM153AQ9UHL3 310 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 CD84Q9UIB8 345 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 TRHDEQ9UKU6 1024 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 FNDC3AQ9Y2H6 1198 aaKnown RBP6.91□□□□□ -1.3
BRCA1-215ENST00000478531 AKAP13Q12802 2813 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 C1orf232A0A0U1RR37 186 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 LIASO43766 372 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 RECQL5O94762 991 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-215ENST00000478531 HEXIM1O94992 359 aaKnown RBP6.91□□□□□ -1.3
BRCA1-215ENST00000478531 PRLP01236 227 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 IFNB1P01574 187 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 ETV3P41162 512 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 CTSKP43235 329 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 WNT3AP56704 352 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 NXPH1P58417 271 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 GNG11P61952 73 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 CDK18Q07002 472 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 PDE1CQ14123 709 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-215ENST00000478531 QPCTQ16769 361 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 CRTC1Q6UUV9 634 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 KYAT3Q6YP21 454 aaKnown RBP6.91□□□□□ -1.3
BRCA1-215ENST00000478531 Q6ZSR6 202 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 HSD11B1LQ7Z5J1 315 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 SLC22A18ASQ8N1D0 253 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 SLC25A41Q8N5S1 370 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 MFSD2AQ8NA29 543 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 TP53I13Q8NBR0 393 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-215ENST00000478531 DENND6BQ8NEG7 585 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 NUS1Q96E22 293 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 SCRN2Q96FV2 425 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 MS4A14Q96JA4 679 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 SPATA13Q96N96 652 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 MCCC1Q96RQ3 725 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-215ENST00000478531 KLF6Q99612 283 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-215ENST00000478531 MLPHQ9BV36 600 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-215ENST00000478531 USP29Q9HBJ7 922 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 SMARCAL1Q9NZC9 954 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 ZNF148Q9UQR1 794 aa6.91□□□□□ -1.3
BRCA1-215ENST00000478531 OR1A2Q9Y585 309 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms