RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 CHMP24386 653 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 PSMA4P25789 261 aaKnown RBP4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 ICAM3P32942 547 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 COPB2P35606 906 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 BSGP35613 385 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 OLR1P78380 273 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 SORDQ00796 357 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 POU5F1Q01860 360 aaKnown RBP4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 LTBQ06643 244 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 DPCR1Q3MIW9 517 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 MMEL1Q495T6 779 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 TMTC3Q6ZXV5 915 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 ZC3HC1Q86WB0 502 aaKnown RBP4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 CLIP4Q8N3C7 705 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 NEXN-AS1Q8NBZ9 246 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 PPHLN1Q8NEY8 458 aaKnown RBP4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 HUS1BQ8NHY5 278 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 NEK9Q8TD19 979 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 FAM149B1Q96BN6 582 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 INTS12Q96CB8 462 aaKnown RBP4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 NAP1L5Q96NT1 182 aaPredicted RBP4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 TKTL2Q9H0I9 626 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 KIF9Q9HAQ2 790 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 ASAH2Q9NR71 780 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 RCOR1Q9UKL0 485 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 MKLN1Q9UL63 735 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 CDC14AQ9UNH5 594 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 ERVK-11Q9UQG0 969 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 CAPN7Q9Y6W3 813 aa4.01□□□□□ -1.77
SMARCA1-204ENST00000478420 IGKV2D-30A0A075B6S6 120 aa4□□□□□ -1.77
SMARCA1-204ENST00000478420 A0A087X0M5 115 aa4□□□□□ -1.77
SMARCA1-204ENST00000478420 A0A1B0GX30 115 aa4□□□□□ -1.77
SMARCA1-204ENST00000478420 PRSS47A8MTI9 375 aa4□□□□□ -1.77
SMARCA1-204ENST00000478420 HNRNPH1P31943 449 aaKnown RBP4□□□□□ -1.77
SMARCA1-204ENST00000478420 RGS2P41220 211 aa4□□□□□ -1.77
SMARCA1-204ENST00000478420 CASP2P42575 452 aa4□□□□□ -1.77
SMARCA1-204ENST00000478420 PIP4K2AP48426 406 aaPredicted RBP4□□□□□ -1.77
SMARCA1-204ENST00000478420 GEMIN4P57678 1058 aaKnown RBP4□□□□□ -1.77
SMARCA1-204ENST00000478420 RPS3AP61247 264 aaKnown RBP4□□□□□ -1.77
SMARCA1-204ENST00000478420 GOLGA8DPQ0D2H9 430 aa4□□□□□ -1.77
SMARCA1-204ENST00000478420 TMEM115Q12893 351 aaPredicted RBP4□□□□□ -1.77
SMARCA1-204ENST00000478420 NAE1Q13564 534 aa4□□□□□ -1.77
SMARCA1-204ENST00000478420 DRAP1Q14919 205 aaPredicted RBP4□□□□□ -1.77
SMARCA1-204ENST00000478420 ALG11Q2TAA5 492 aa4□□□□□ -1.77
SMARCA1-204ENST00000478420 COL28A1Q2UY09 1125 aa4□□□□□ -1.77
SMARCA1-204ENST00000478420 TSSK4Q6SA08 328 aa4□□□□□ -1.77
SMARCA1-204ENST00000478420 SPATA2LQ8IUW3 424 aaPredicted RBP4□□□□□ -1.77
SMARCA1-204ENST00000478420 ADAMTS15Q8TE58 950 aa4□□□□□ -1.77
SMARCA1-204ENST00000478420 PSPC1Q8WXF1 523 aaKnown RBP4□□□□□ -1.77
SMARCA1-204ENST00000478420 WASF1Q92558 559 aa4□□□□□ -1.77
SMARCA1-204ENST00000478420 SKA1Q96BD8 255 aa4□□□□□ -1.77
SMARCA1-204ENST00000478420 MKKSQ9NPJ1 570 aaPredicted RBP4□□□□□ -1.77
SMARCA1-204ENST00000478420 GPR108Q9NPR9 543 aa4□□□□□ -1.77
SMARCA1-204ENST00000478420 LIMA1Q9UHB6 759 aaKnown RBP4□□□□□ -1.77
SMARCA1-204ENST00000478420 STON1Q9Y6Q2 735 aa4□□□□□ -1.77
SMARCA1-204ENST00000478420 TDRD9Q8NDG6 1382 aaKnown RBP4□□□□□ -1.77
SMARCA1-204ENST00000478420 ATXN2Q99700 1313 aaKnown RBP3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 IGLV5-52A0A0A0MRZ9 124 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 A0A0U1RQJ8 604 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 A0A1W2PRG0 241 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 CLEC18AA5D8T8 446 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 PAGE4O60829 102 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 FCGR1AP12314 374 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 KRT10P13645 584 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 ITGB8P26012 769 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 CCKARP32238 428 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 STX2P32856 288 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 RAD23BP54727 409 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 ZXDBP98169 803 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 TRAF3Q13114 568 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 OLIG2Q13516 323 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 ERV3-1Q14264 604 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 FRG1Q14331 258 aaKnown RBP3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 KRT32Q14532 448 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 C2orf68Q2NKX9 166 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 USP41Q3LFD5 358 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 PPP6R3Q5H9R7 873 aaPredicted RBP3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 C6orf141Q5SZD1 244 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 HAUS3Q68CZ6 603 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 FAM180BQ6P0A1 224 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 B3GNT6Q6ZMB0 384 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 QSOX2Q6ZRP7 698 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 MTSS1LQ765P7 747 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 WDR63Q8IWG1 891 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 DSELQ8IZU8 1212 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 CCDC89Q8N998 374 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 CLEC18CQ8NCF0 446 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 TMED6Q8WW62 240 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 MTBPQ96DY7 904 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 MED30Q96HR3 178 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 SLC41A2Q96JW4 573 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 MAP7D2Q96T17 732 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 FAM110AQ9BQ89 295 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 STRA6Q9BX79 667 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 TM6SF1Q9BZW5 370 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 ESRP2Q9H6T0 727 aaKnown RBP3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 DIAPH3Q9NSV4 1193 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 SELENONQ9NZV5 590 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 DLGAP2Q9P1A6 1054 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 KCNE2Q9Y6J6 123 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms