RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 SLC47A2Q86VL8 602 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 DEFB106AQ8N104 65 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 RYBPQ8N488 228 aaPredicted RBP7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 RBMXL3Q8N7X1 1067 aaKnown RBP7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 OR2AP1Q8NGE2 309 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 PATE1Q8WXA2 126 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 SLC2A13Q96QE2 648 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 LGR4Q9BXB1 951 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 FAM204AQ9H8W3 233 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 MPP6Q9NZW5 540 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 COX16Q9P0S2 106 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 TAAR2Q9P1P5 351 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 MAP10Q9P2G4 905 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 SMC3Q9UQE7 1217 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 ST14Q9Y5Y6 855 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 ADGRG1Q9Y653 693 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 POLEQ07864 2286 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 MED13LQ71F56 2210 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 ZSCAN5CA6NGD5 496 aaPredicted RBP7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 E5RJQ4 531 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 CACNB4O00305 520 aaPredicted RBP7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 POLR2DO15514 142 aaKnown RBP7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 DPM1O60762 260 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 GSRP00390 522 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 PCCBP05166 539 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 TBXAS1P24557 533 aaPredicted RBP7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 NASPP49321 788 aaPredicted RBP7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 CCL11P51671 97 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 ITGA1P56199 1179 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 SNRPD1P62314 119 aaKnown RBP7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 ADAM9Q13443 819 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 RAPGEF1Q13905 1077 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 PLEKHN1Q494U1 663 aaPredicted RBP7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 CRB2Q5IJ48 1285 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 SNAP47Q5SQN1 464 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 CPZQ66K79 652 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 WDR74Q6RFH5 385 aaPredicted RBP7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 GRAMD1CQ8IYS0 662 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 CISD2Q8N5K1 135 aaKnown RBP7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 LINC00301Q8NCQ3 95 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 THAP4Q8WY91 577 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 ARHGEF2Q92974 986 aaKnown RBP7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 HMCESQ96FZ2 354 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 C1orf74Q96LT6 269 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 ULBP3Q9BZM4 244 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 ING2Q9H160 280 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 ATP13A1Q9HD20 1204 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 ARHGEF38Q9NXL2 777 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 SIDT1Q9NXL6 827 aaKnown RBP7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 ZNF451Q9Y4E5 1061 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 PCDHGA10Q9Y5H3 936 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 SNX10Q9Y5X0 201 aa7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 ANKHD1Q8IWZ3 2542 aaKnown RBP7.34□□□□□ -1.23
SPTLC1-205ENST00000477888 PRSS38A1L453 326 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 A6NCN8 305 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 PRSS44E7EML9 344 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 LRRTM2O43300 516 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 STX10O60499 249 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 GLI1P08151 1106 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 KELP23276 732 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 RPL13P26373 211 aaKnown RBP7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 AK4P27144 223 aaPredicted RBP7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 PTGER4P35408 488 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 ACVRL1P37023 503 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 NOP2P46087 812 aaKnown RBP7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 CXCR3P49682 368 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 LIG3P49916 1009 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 SUOXP51687 545 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 NDST2P52849 883 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 GNA12Q03113 381 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 DNM1Q05193 864 aaKnown RBP7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 ELP6Q0PNE2 266 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 ILF3Q12906 894 aaKnown RBP eCLIP7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 CHAF1BQ13112 559 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 NME3Q13232 169 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 BIRC2Q13490 618 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 POLD3Q15054 466 aaPredicted RBP7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 CHRNA6Q15825 494 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 UGT8Q16880 541 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 TUSC1Q2TAM9 212 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 ATXN7L2Q5T6C5 722 aaPredicted RBP7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 DENND1BQ6P3S1 775 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 GDF7Q7Z4P5 450 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 HPS6Q86YV9 775 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 GALNT6Q8NCL4 622 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 HCAR2Q8TDS4 363 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 RNF31Q96EP0 1072 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 GSDMCQ9BYG8 508 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 TKTL2Q9H0I9 626 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 CARS2Q9HA77 564 aaKnown RBP7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 ACSS2Q9NR19 701 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 EXOC1Q9NV70 894 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 TRNAU1APQ9NX07 287 aaKnown RBP7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 PADI1Q9ULC6 663 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 MFHAS1Q9Y4C4 1052 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 PCDHB4Q9Y5E5 795 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 DCHS2Q6V1P9 2916 aa7.33□□□□□ -1.24
SPTLC1-205ENST00000477888 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.32□□□□□ -1.24
SPTLC1-205ENST00000477888 GOLGA6L3A6NEY3 463 aa7.32□□□□□ -1.24
SPTLC1-205ENST00000477888 ZG16O60844 167 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms