RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 BLOC1S5Q8TDH9 187 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 SH3RF2Q8TEC5 729 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 SLC22A17Q8WUG5 538 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 INPP5DQ92835 1189 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 CDKN2AIPNLQ96HQ2 116 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 ELMO2Q96JJ3 720 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 FAR2Q96K12 515 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 RAB3IPQ96QF0 476 aaPredicted RBP7.96□□□□□ -1.14
VMA21-203ENST00000477649 SLC22A12Q96S37 553 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 CYP2S1Q96SQ9 504 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 TRMOQ9BU70 441 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 C1QTNF1Q9BXJ1 281 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 MCOLN1Q9GZU1 580 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 CCDC68Q9H2F9 335 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 ATP13A3Q9H7F0 1226 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 SYTL2Q9HCH5 934 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 MAN1C1Q9NR34 630 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 TDP1Q9NUW8 608 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 OXSMQ9NWU1 459 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 MARK1Q9P0L2 795 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 CXXC1Q9P0U4 656 aaPredicted RBP7.96□□□□□ -1.14
VMA21-203ENST00000477649 SLC17A6Q9P2U8 582 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 LHX3Q9UBR4 397 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 VTI1BQ9UEU0 232 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 SLC2A6Q9UGQ3 507 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 HAO1Q9UJM8 370 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 TMCO1Q9UM00 188 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 SLC8A2Q9UPR5 921 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 HS3ST2Q9Y278 367 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 PKP3Q9Y446 797 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 CHD5Q8TDI0 1954 aa7.96□□□□□ -1.14
VMA21-203ENST00000477649 KIAA1671Q9BY89 1806 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 GOLGA8QA0A0J9YX86 632 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 GOLGA8OA6NCC3 632 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 GOLGA8NF8WBI6 632 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 STX7O15400 261 aaKnown RBP7.95□□□□□ -1.14
VMA21-203ENST00000477649 CCL16O15467 120 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 HTRA2O43464 458 aaPredicted RBP7.95□□□□□ -1.14
VMA21-203ENST00000477649 NPHS1O60500 1241 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 CLASP2O75122 1294 aaKnown RBP7.95□□□□□ -1.14
VMA21-203ENST00000477649 NDUFS3O75489 264 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 UBOX5O94941 541 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 PGLSO95336 258 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 CD160O95971 181 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 GOT2P00505 430 aaKnown RBP7.95□□□□□ -1.14
VMA21-203ENST00000477649 PRLP01236 227 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 RHOP08100 348 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 SPATA31D3P0C874 917 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 ALOX15P16050 662 aaPredicted RBP7.95□□□□□ -1.14
VMA21-203ENST00000477649 EN2P19622 333 aaPredicted RBP7.95□□□□□ -1.14
VMA21-203ENST00000477649 ATP5F1P24539 256 aaPredicted RBP7.95□□□□□ -1.14
VMA21-203ENST00000477649 MZF1P28698 734 aaPredicted RBP7.95□□□□□ -1.14
VMA21-203ENST00000477649 SERPINA4P29622 427 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 HMGCLP35914 325 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 SGSHP51688 502 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 MNAT1P51948 309 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 STC1P52823 247 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 EPHB1P54762 984 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 TAS2R39P59534 338 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 ERVK-21P61565 698 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 MPP1Q00013 466 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 BCL2L1Q07817 233 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 GALNT1Q10472 559 aaPredicted RBP7.95□□□□□ -1.14
VMA21-203ENST00000477649 USP4Q13107 963 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 PRKAA1Q13131 559 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 CRY1Q16526 586 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 PPM1JQ5JR12 505 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 HECTD2Q5U5R9 776 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 METTL21CQ5VZV1 264 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 LRRC8EQ6NSJ5 796 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 UGT3A1Q6NUS8 523 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 SPATA31D4Q6ZUB0 917 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 KDELC2Q7Z4H8 507 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 PTAR1Q7Z6K3 402 aaPredicted RBP7.95□□□□□ -1.14
VMA21-203ENST00000477649 C10orf107Q8IVU9 208 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 BBS7Q8IWZ6 715 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 C7orf61Q8IZ16 206 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 CBARPQ8N350 705 aaPredicted RBP7.95□□□□□ -1.14
VMA21-203ENST00000477649 FITM2Q8N6M3 262 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.95□□□□□ -1.14
VMA21-203ENST00000477649 GPATCH11Q8N954 259 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 SHKBP1Q8TBC3 707 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 WFIKKN2Q8TEU8 576 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 PPP2R3CQ969Q6 453 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 ERP27Q96DN0 273 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 DNAJC1Q96KC8 554 aaKnown RBP7.95□□□□□ -1.14
VMA21-203ENST00000477649 UBXN10Q96LJ8 280 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 TBATAQ96M53 351 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 ZNF641Q96N77 438 aaPredicted RBP7.95□□□□□ -1.14
VMA21-203ENST00000477649 ASB2Q96Q27 587 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 TMEM237Q96Q45 408 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 LYSMD1Q96S90 227 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 CDCA3Q99618 268 aaPredicted RBP7.95□□□□□ -1.14
VMA21-203ENST00000477649 OMDQ99983 421 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 CPEB1Q9BZB8 566 aaKnown RBP7.95□□□□□ -1.14
VMA21-203ENST00000477649 ILKAPQ9H0C8 392 aaPredicted RBP7.95□□□□□ -1.14
VMA21-203ENST00000477649 ALG13Q9NP73 1137 aaKnown RBP7.95□□□□□ -1.14
VMA21-203ENST00000477649 ABCF3Q9NUQ8 709 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 DNAJC28Q9NX36 388 aa7.95□□□□□ -1.14
VMA21-203ENST00000477649 IL1RAPL1Q9NZN1 696 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms