RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 LMX1AQ8TE12 382 aa21.81■■□□□ 1.08
COL9A3-211ENST00000477612 PDCD6IPQ8WUM4 868 aaKnown RBP21.81■■□□□ 1.08
COL9A3-211ENST00000477612 LRRC61Q9BV99 259 aa21.81■■□□□ 1.08
COL9A3-211ENST00000477612 SLC13A1Q9BZW2 595 aa21.81■■□□□ 1.08
COL9A3-211ENST00000477612 HAUS2Q9NVX0 235 aa21.81■■□□□ 1.08
COL9A3-211ENST00000477612 RBM22Q9NW64 420 aaKnown RBP eCLIP21.81■■□□□ 1.082e-6■■■■□ 23.8
COL9A3-211ENST00000477612 DDX56Q9NY93 547 aaKnown RBP21.81■■□□□ 1.08
COL9A3-211ENST00000477612 NCKIPSDQ9NZQ3 722 aa21.81■■□□□ 1.08
COL9A3-211ENST00000477612 RAI2Q9Y5P3 530 aa21.81■■□□□ 1.08
COL9A3-211ENST00000477612 COL27A1Q8IZC6 1860 aaPredicted RBP21.8■■□□□ 1.08
COL9A3-211ENST00000477612 FAM149AA5PLN7 773 aa21.8■■□□□ 1.08
COL9A3-211ENST00000477612 LMO7DNF2Z398 122 aa21.8■■□□□ 1.08
COL9A3-211ENST00000477612 TAF4O00268 1085 aa21.8■■□□□ 1.08
COL9A3-211ENST00000477612 PDHA1P08559 390 aa21.8■■□□□ 1.08
COL9A3-211ENST00000477612 JUPP14923 745 aa21.8■■□□□ 1.08
COL9A3-211ENST00000477612 HNF1BP35680 557 aa21.8■■□□□ 1.08
COL9A3-211ENST00000477612 KIAA1024LP59773 190 aa21.8■■□□□ 1.08
COL9A3-211ENST00000477612 INSM1Q01101 510 aaPredicted RBP21.8■■□□□ 1.08
COL9A3-211ENST00000477612 PRRT3Q5FWE3 981 aa21.8■■□□□ 1.08
COL9A3-211ENST00000477612 FAXCQ5TGI0 409 aa21.8■■□□□ 1.08
COL9A3-211ENST00000477612 HES3Q5TGS1 186 aa21.8■■□□□ 1.08
COL9A3-211ENST00000477612 PROSER1Q86XN7 944 aa21.8■■□□□ 1.08
COL9A3-211ENST00000477612 MARCH9Q86YJ5 346 aa21.8■■□□□ 1.08
COL9A3-211ENST00000477612 ATL2Q8NHH9 583 aa21.8■■□□□ 1.08
COL9A3-211ENST00000477612 TPCN2Q8NHX9 752 aa21.8■■□□□ 1.08
COL9A3-211ENST00000477612 WDR92Q96MX6 357 aa21.8■■□□□ 1.08
COL9A3-211ENST00000477612 IL12RB2Q99665 862 aa21.8■■□□□ 1.08
COL9A3-211ENST00000477612 BOCQ9BWV1 1114 aa21.8■■□□□ 1.08
COL9A3-211ENST00000477612 CLPBQ9H078 707 aa21.8■■□□□ 1.08
COL9A3-211ENST00000477612 EVA1BQ9NVM1 165 aa21.8■■□□□ 1.08
COL9A3-211ENST00000477612 OR1A2Q9Y585 309 aa21.8■■□□□ 1.08
COL9A3-211ENST00000477612 A0A0A6YYK5 440 aaPredicted RBP21.79■■□□□ 1.08
COL9A3-211ENST00000477612 TRABD2BA6NFA1 517 aa21.79■■□□□ 1.08
COL9A3-211ENST00000477612 A8MX80 341 aa21.79■■□□□ 1.08
COL9A3-211ENST00000477612 KRT37O76014 449 aa21.79■■□□□ 1.08
COL9A3-211ENST00000477612 PCCBP05166 539 aa21.79■■□□□ 1.08
COL9A3-211ENST00000477612 ZFXP17010 805 aaPredicted RBP21.79■■□□□ 1.08
COL9A3-211ENST00000477612 COMTP21964 271 aa21.79■■□□□ 1.08
COL9A3-211ENST00000477612 LHCGRP22888 699 aa21.79■■□□□ 1.08
COL9A3-211ENST00000477612 ITKQ08881 620 aa21.79■■□□□ 1.08
COL9A3-211ENST00000477612 TAZQ16635 292 aa21.79■■□□□ 1.08
COL9A3-211ENST00000477612 ALG11Q2TAA5 492 aa21.79■■□□□ 1.08
COL9A3-211ENST00000477612 PNCKQ6P2M8 343 aa21.79■■□□□ 1.08
COL9A3-211ENST00000477612 ENPP7Q6UWV6 458 aa21.79■■□□□ 1.08
COL9A3-211ENST00000477612 FSTL5Q8N475 847 aaPredicted RBP21.79■■□□□ 1.08
COL9A3-211ENST00000477612 FUBP1Q96AE4 644 aaKnown RBP21.79■■□□□ 1.08
COL9A3-211ENST00000477612 PANX2Q96RD6 677 aa21.79■■□□□ 1.08
COL9A3-211ENST00000477612 ANP32EQ9BTT0 268 aa21.79■■□□□ 1.08
COL9A3-211ENST00000477612 CCDC86Q9H6F5 360 aaKnown RBP21.79■■□□□ 1.08
COL9A3-211ENST00000477612 PCDHA13Q9Y5I0 950 aa21.79■■□□□ 1.08
COL9A3-211ENST00000477612 ALG6Q9Y672 507 aa21.79■■□□□ 1.08
COL9A3-211ENST00000477612 DGKBQ9Y6T7 804 aa21.79■■□□□ 1.08
COL9A3-211ENST00000477612 ARHGEF17Q96PE2 2063 aaPredicted RBP21.78■■□□□ 1.08
COL9A3-211ENST00000477612 ACACAQ13085 2346 aa21.78■■□□□ 1.08
COL9A3-211ENST00000477612 EME2A4GXA9 379 aaPredicted RBP21.78■■□□□ 1.08
COL9A3-211ENST00000477612 NPIPB15A6NHN6 443 aaPredicted RBP21.78■■□□□ 1.08
COL9A3-211ENST00000477612 SRRM3A6NNA2 597 aaPredicted RBP21.78■■□□□ 1.08
COL9A3-211ENST00000477612 TNFRSF10CO14798 259 aa21.78■■□□□ 1.08
COL9A3-211ENST00000477612 RASGRP1O95267 797 aa21.78■■□□□ 1.08
COL9A3-211ENST00000477612 HLA-DQB2P05538 268 aa21.78■■□□□ 1.08
COL9A3-211ENST00000477612 TSHRP16473 764 aa21.78■■□□□ 1.08
COL9A3-211ENST00000477612 CYLC1P35663 651 aaPredicted RBP21.78■■□□□ 1.08
COL9A3-211ENST00000477612 SRP54P61011 504 aaKnown RBP21.78■■□□□ 1.08
COL9A3-211ENST00000477612 IFI35P80217 286 aaPredicted RBP21.78■■□□□ 1.08
COL9A3-211ENST00000477612 DSC2Q02487 901 aa21.78■■□□□ 1.08
COL9A3-211ENST00000477612 ACOX1Q15067 660 aa21.78■■□□□ 1.08
COL9A3-211ENST00000477612 DEFB133Q30KQ1 61 aa21.78■■□□□ 1.08
COL9A3-211ENST00000477612 C6orf132Q5T0Z8 1188 aa21.78■■□□□ 1.08
COL9A3-211ENST00000477612 LVRNQ6Q4G3 990 aa21.78■■□□□ 1.08
COL9A3-211ENST00000477612 USP45Q70EL2 814 aa21.78■■□□□ 1.08
COL9A3-211ENST00000477612 GAS2L3Q86XJ1 694 aa21.78■■□□□ 1.08
COL9A3-211ENST00000477612 NDUFAF2Q8N183 169 aa21.78■■□□□ 1.08
COL9A3-211ENST00000477612 PELI3Q8N2H9 469 aa21.78■■□□□ 1.08
COL9A3-211ENST00000477612 TSACCQ96A04 125 aaPredicted RBP21.78■■□□□ 1.08
COL9A3-211ENST00000477612 DTD2Q96FN9 168 aa21.78■■□□□ 1.08
COL9A3-211ENST00000477612 ZNF830Q96NB3 372 aaPredicted RBP21.78■■□□□ 1.08
COL9A3-211ENST00000477612 OLFM3Q96PB7 478 aa21.78■■□□□ 1.08
COL9A3-211ENST00000477612 LGMNQ99538 433 aa21.78■■□□□ 1.08
COL9A3-211ENST00000477612 TDRD1Q9BXT4 1180 aaKnown RBP21.78■■□□□ 1.08
COL9A3-211ENST00000477612 MAK16Q9BXY0 300 aaKnown RBP21.78■■□□□ 1.08
COL9A3-211ENST00000477612 A0A0J9YYE9 177 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 APOL1O14791 398 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 YY2O15391 372 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 PSTPIP1O43586 416 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 PRLP01236 227 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 TRBC1P01850 177 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 KELP23276 732 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 TEAD1P28347 426 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 CLDN6P56747 220 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 RPL26P61254 145 aaKnown RBP21.77■■□□□ 1.08
COL9A3-211ENST00000477612 NIPAL4Q0D2K0 466 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 TARDBPQ13148 414 aaKnown RBP eCLIP21.77■■□□□ 1.08
COL9A3-211ENST00000477612 C1orf61Q13536 156 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 ELOCQ15369 112 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 CDCP2Q5VXM1 449 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 TECPR1Q7Z6L1 1165 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 NLRP8Q86W28 1048 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 HID1Q8IV36 788 aa21.77■■□□□ 1.08
COL9A3-211ENST00000477612 RAVER1Q8IY67 606 aaKnown RBP21.77■■□□□ 1.08
COL9A3-211ENST00000477612 CNTD1Q8N815 330 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms