RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 FNBP1LQ5T0N5 605 aa16.96■□□□□ 0.31
EPHB4-204ENST00000477446 ITPRIPL1Q6GPH6 555 aa16.96■□□□□ 0.31
EPHB4-204ENST00000477446 C3orf62Q6ZUJ4 267 aa16.96■□□□□ 0.31
EPHB4-204ENST00000477446 YTHDF3Q7Z739 585 aaKnown RBP16.96■□□□□ 0.31
EPHB4-204ENST00000477446 AADATQ8N5Z0 425 aa16.96■□□□□ 0.31
EPHB4-204ENST00000477446 ARRDC3Q96B67 414 aa16.96■□□□□ 0.31
EPHB4-204ENST00000477446 ZNF641Q96N77 438 aaPredicted RBP16.96■□□□□ 0.31
EPHB4-204ENST00000477446 NSRP1Q9H0G5 558 aaKnown RBP16.96■□□□□ 0.31
EPHB4-204ENST00000477446 CD93Q9NPY3 652 aa16.96■□□□□ 0.31
EPHB4-204ENST00000477446 ITM2CQ9NQX7 267 aa16.96■□□□□ 0.31
EPHB4-204ENST00000477446 NKIRAS1Q9NYS0 192 aa16.96■□□□□ 0.31
EPHB4-204ENST00000477446 SCML1Q9UN30 329 aa16.96■□□□□ 0.31
EPHB4-204ENST00000477446 A0A1W2PP55 124 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 TMEM120BA0PK00 339 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 PLK4O00444 970 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 AXIN1O15169 862 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 GALR2O43603 387 aaPredicted RBP16.95■□□□□ 0.3
EPHB4-204ENST00000477446 MT-CYBP00156 380 aaPredicted RBP16.95■□□□□ 0.3
EPHB4-204ENST00000477446 ITGB7P26010 798 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 PSMB4P28070 264 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 DRD3P35462 400 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 NUBP1P53384 320 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 TRAF2Q12933 501 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 ANGPT1Q15389 498 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 GKAP1Q5VSY0 366 aaPredicted RBP16.95■□□□□ 0.3
EPHB4-204ENST00000477446 CNPY4Q8N129 248 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 TADA1Q96BN2 335 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 SGSM3Q96HU1 749 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 PPP1R16AQ96I34 528 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 ZNF317Q96PQ6 595 aaPredicted RBP16.95■□□□□ 0.3
EPHB4-204ENST00000477446 GORASP1Q9BQQ3 440 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 ACSS3Q9H6R3 686 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 RAB6BQ9NRW1 208 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 FBXL12Q9NXK8 326 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 UBP1Q9NZI7 540 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 USP36Q9P275 1121 aaKnown RBP16.95■□□□□ 0.3
EPHB4-204ENST00000477446 PSMC3IPQ9P2W1 217 aaPredicted RBP16.95■□□□□ 0.3
EPHB4-204ENST00000477446 SERGEFQ9UGK8 458 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 RABGEF1Q9UJ41 708 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 SMG5Q9UPR3 1016 aaKnown RBP16.95■□□□□ 0.3
EPHB4-204ENST00000477446 RRP15Q9Y3B9 282 aaKnown RBP16.95■□□□□ 0.3
EPHB4-204ENST00000477446 RAI2Q9Y5P3 530 aa16.95■□□□□ 0.3
EPHB4-204ENST00000477446 GOLGA8MH3BSY2 632 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 HTRA2O43464 458 aaPredicted RBP16.94■□□□□ 0.3
EPHB4-204ENST00000477446 SOCS5O75159 536 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 TMEM63AO94886 807 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 METTL18O95568 372 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 TPSB2P20231 275 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 FNTBP49356 437 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 TPMTP51580 245 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 SARNPP82979 210 aaKnown RBP16.94■□□□□ 0.3
EPHB4-204ENST00000477446 CDK16Q00536 496 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 CNTN1Q12860 1018 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 FASTKD3Q14CZ7 662 aaKnown RBP16.94■□□□□ 0.3
EPHB4-204ENST00000477446 TPSAB1Q15661 275 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 BBS9Q3SYG4 887 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 TTC31Q49AM3 519 aaPredicted RBP16.94■□□□□ 0.3
EPHB4-204ENST00000477446 HDDC3Q8N4P3 179 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 FBXO36Q8NEA4 188 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 PDCD6IPQ8WUM4 868 aaKnown RBP16.94■□□□□ 0.3
EPHB4-204ENST00000477446 DYDC1Q8WWB3 177 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 ECHDC3Q96DC8 303 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 OXNAD1Q96HP4 312 aaPredicted RBP16.94■□□□□ 0.3
EPHB4-204ENST00000477446 OMDQ99983 421 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 SSU72Q9NP77 194 aaKnown RBP16.94■□□□□ 0.3
EPHB4-204ENST00000477446 KCNK9Q9NPC2 374 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 DYRK4Q9NR20 520 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 CCDC163A0A0D9SF12 145 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 C16orf96A6NNT2 1141 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 POC1B-GALNT4F8VUJ3 575 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 PRPF4O43172 522 aaKnown RBP eCLIP16.94■□□□□ 0.36e-7■■■■□ 23.2
EPHB4-204ENST00000477446 RNASEH2AO75792 299 aaKnown RBP16.94■□□□□ 0.3
EPHB4-204ENST00000477446 DRD4P21917 467 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 FDFT1P37268 417 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 P2RY2P41231 377 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 GPX6P59796 221 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 PARP6Q2NL67 630 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 USP30Q70CQ3 517 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 ERN2Q76MJ5 926 aaKnown RBP16.94■□□□□ 0.3
EPHB4-204ENST00000477446 PARS2Q7L3T8 475 aaKnown RBP16.94■□□□□ 0.3
EPHB4-204ENST00000477446 TRABD2AQ86V40 505 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 ZSWIM9Q86XI8 627 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 CYP4X1Q8N118 509 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 TAB3Q8N5C8 712 aaPredicted RBP16.94■□□□□ 0.3
EPHB4-204ENST00000477446 HCAR2Q8TDS4 363 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 GANCQ8TET4 914 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 RLN3Q8WXF3 142 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 CYTH2Q99418 400 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 TDRD1Q9BXT4 1180 aaKnown RBP16.94■□□□□ 0.3
EPHB4-204ENST00000477446 HDAC8Q9BY41 377 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 RABEP2Q9H5N1 569 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 DKK3Q9UBP4 350 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 CTNNAL1Q9UBT7 734 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 PCDHB9Q9Y5E1 797 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 FAM169AQ9Y6X4 670 aa16.94■□□□□ 0.3
EPHB4-204ENST00000477446 TCRBV7S3A2A0A539 114 aa16.93■□□□□ 0.3
EPHB4-204ENST00000477446 TSPAN11A1L157 253 aa16.93■□□□□ 0.3
EPHB4-204ENST00000477446 FZD6O60353 706 aa16.93■□□□□ 0.3
EPHB4-204ENST00000477446 ZNF217O75362 1048 aa16.93■□□□□ 0.3
EPHB4-204ENST00000477446 PMPCBO75439 489 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms