RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 FMR1NBQ8N0W7 255 aaPredicted RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 OR4N4Q8N0Y3 316 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 LILRA2Q8N149 483 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 BATF2Q8N1L9 274 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 BBS5Q8N3I7 341 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 GUF1Q8N442 669 aaKnown RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 ARL14Q8N4G2 192 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 NIPA2Q8N8Q9 360 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 AGBL3Q8NEM8 1001 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 SLC24A4Q8NFF2 622 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 OR8K3Q8NH51 312 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 SUN3Q8TAQ9 357 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 GRAPLQ8TC17 118 aaPredicted RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 SUN5Q8TC36 379 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 AGR3Q8TD06 166 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 PTPMT1Q8WUK0 201 aaPredicted RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 TEKT4Q8WW24 435 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 IP6K1Q92551 441 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 RAPGEF5Q92565 580 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 DNASE1L2Q92874 299 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 GFM2Q969S9 779 aaKnown RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 SLAMF9Q96A28 289 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 RNFT2Q96EX2 444 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 C14orf79Q96F83 325 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 NAF1Q96HR8 494 aaKnown RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 FBXL20Q96IG2 436 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 TPD52L3Q96J77 140 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 LRIG1Q96JA1 1093 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 FAM81BQ96LP2 452 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 NSMCE2Q96MF7 247 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 HEXIM2Q96MH2 286 aaKnown RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 GDAP1L1Q96MZ0 367 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 PAFAH2Q99487 392 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 NPAS1Q99742 590 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 CCT7Q99832 543 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 SEMA3CQ99985 751 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 GAL3ST1Q99999 423 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 CCDC77Q9BR77 488 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 H2AFJQ9BTM1 129 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 HERC2P3Q9BVR0 1158 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 NPLQ9BXD5 320 aaPredicted RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 TEX13AQ9BXU3 409 aaPredicted RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 FAM129AQ9BZQ8 928 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 POLR1EQ9GZS1 481 aaKnown RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 MMP27Q9H306 513 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 EHD1Q9H4M9 534 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 POLR1BQ9H9Y6 1135 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 PRMT8Q9NR22 394 aaPredicted RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 GLRX2Q9NS18 164 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 TMEM184CQ9NVA4 438 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 DNAJC17Q9NVM6 304 aaKnown RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 THAP1Q9NVV9 213 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 SOHLH2Q9NX45 425 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 DTLQ9NZJ0 730 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 SPASTQ9UBP0 616 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 TRIM10Q9UDY6 481 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 ATP6V1HQ9UI12 483 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 DNAI1Q9UI46 699 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 MBD1Q9UIS9 605 aaPredicted RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 ITGA11Q9UKX5 1188 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 SNX7Q9UNH6 387 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 DLGAP4Q9Y2H0 992 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 VWA7Q9Y334 891 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 ASB3Q9Y575 518 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 N6AMT1Q9Y5N5 214 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 COPG1Q9Y678 874 aaKnown RBP2.93□□□□□ -1.94
HMGN4-202ENST00000477243 ADGRB3O60242 1522 aa2.93□□□□□ -1.94
HMGN4-202ENST00000477243 KIAA0100Q14667 2235 aaKnown RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 PLXNC1O60486 1568 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 NRXN1Q9ULB1 1477 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 LOC102723996A0A087X1L8 192 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 FAM230AA0A1W2PPH8 454 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 A0A1W2PQF6 199 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 GXYLT2A0PJZ3 443 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 EME2A4GXA9 379 aaPredicted RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 TCAF2A6NFQ2 919 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 ARHGAP42A6NI28 874 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 KDM4EB2RXH2 506 aaPredicted RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 QSOX1O00391 747 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 PIK3R2O00459 728 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 ZNF213O14771 459 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 PER2O15055 1255 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 CETN3O15182 167 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 SMAD9O15198 467 aaKnown RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 CASC3O15234 703 aaKnown RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 EIF3DO15371 548 aaKnown RBP eCLIP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 POLR2DO15514 142 aaKnown RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 PAPSS1O43252 624 aaPredicted RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 CTIFO43310 598 aaKnown RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 CCNT1O60563 726 aaKnown RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 CRCPO75575 148 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 PRDM1O75626 825 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 SLC25A12O75746 678 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 RAD17O75943 681 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 HAUS5O94927 633 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 KCNK5O95279 499 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 AMHP03971 560 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 KRT6BP04259 564 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms