RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 FOXN3O00409 490 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-214ENST00000477152 TRIM38O00635 465 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 AQP9O43315 295 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 TLX3O43711 291 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-214ENST00000477152 SNAP91O60641 907 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 USP12O75317 370 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 CSO75390 466 aaKnown RBP7.36□□□□□ -1.23
BRCA1-214ENST00000477152 GSRP00390 522 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 ALPIP09923 528 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 CYP11B1P15538 503 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 RAB6AP20340 208 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 HTR1BP28222 390 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 SDC4P31431 198 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 TAS2R38P59533 333 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 NRG1Q02297 640 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-214ENST00000477152 SLBPQ14493 270 aaKnown RBP eCLIP7.36□□□□□ -1.23
BRCA1-214ENST00000477152 PTPN20Q4JDL3 420 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 ZNF805Q5CZA5 627 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 CDCP2Q5VXM1 449 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 GJB7Q6PEY0 223 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 RBM44Q6ZP01 1051 aaKnown RBP7.36□□□□□ -1.23
BRCA1-214ENST00000477152 DPY19L3Q6ZPD9 716 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 TFAP2DQ7Z6R9 452 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 C14orf80Q86SX3 495 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 NOP9Q86U38 636 aaKnown RBP7.36□□□□□ -1.23
BRCA1-214ENST00000477152 SLC47A2Q86VL8 602 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 ZNF354CQ86Y25 554 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 ANKRD20A12PQ8NF67 263 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 CXorf40AQ8TE69 158 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 NT5C3BQ969T7 300 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 ARRDC3Q96B67 414 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 PSMB7Q99436 277 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 TM9SF2Q99805 663 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 TUBGCP2Q9BSJ2 902 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 ZDHHC6Q9H6R6 413 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 AKTIPQ9H8T0 292 aa7.36□□□□□ -1.23
BRCA1-214ENST00000477152 HECAQ9UBI9 543 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-214ENST00000477152 K7ESM1 405 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 TM7SF2O76062 418 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 CNTN5O94779 1100 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 IGSF6O95976 241 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 PAK4O96013 591 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-214ENST00000477152 MT-CO1P00395 513 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 CTSLP07711 333 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 CTSEP14091 401 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 ITPKBP27987 946 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 NOS3P29474 1203 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 CCNHP51946 323 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-214ENST00000477152 CFHR1Q03591 330 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 ELP6Q0PNE2 266 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 EIF3IQ13347 325 aaKnown RBP7.35□□□□□ -1.23
BRCA1-214ENST00000477152 PDE1CQ14123 709 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-214ENST00000477152 DRAP1Q14919 205 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-214ENST00000477152 ELOCQ15369 112 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 ALFQ53S48 1182 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 CFAP58Q5T655 872 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 PRAMEF13Q5VWM6 474 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 MRM1Q6IN84 353 aaKnown RBP7.35□□□□□ -1.23
BRCA1-214ENST00000477152 CDPF1Q6NVV7 123 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 RWDD4Q6NW29 188 aaKnown RBP7.35□□□□□ -1.23
BRCA1-214ENST00000477152 PPP1R2P3Q6NXS1 205 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 GCNT7Q6ZNI0 430 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 SPACA3Q8IXA5 215 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 FSTL5Q8N475 847 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-214ENST00000477152 OR6P1Q8NGX9 317 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 HCAR2Q8TDS4 363 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 LMX1AQ8TE12 382 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 GDAP1L1Q96MZ0 367 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 TBCBQ99426 244 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 NCAPGQ9BPX3 1015 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 STK33Q9BYT3 514 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 STRADBQ9C0K7 418 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 ACP6Q9NPH0 428 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 MPP6Q9NZW5 540 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 SIRPGQ9P1W8 387 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 FADS3Q9Y5Q0 445 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 DOCK9Q9BZ29 2069 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 A0A0D9SEW6 157 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 CPED1A4D0V7 1026 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 GOLGA8SH3BPF8 625 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 KRIT1O00522 736 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 KLK10O43240 276 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 RAMP2O60895 175 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 ENDOD1O94919 500 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 CCDC172P0C7W6 258 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 NFKBIAP25963 317 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 EEF1GP26641 437 aaKnown RBP7.35□□□□□ -1.23
BRCA1-214ENST00000477152 NUMBP49757 651 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 CLDN2P57739 230 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 TLE3Q04726 772 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 PEX6Q13608 980 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 SPIDRQ14159 915 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 FKBP15Q5T1M5 1219 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 FAXCQ5TGI0 409 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 LVRNQ6Q4G3 990 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 LINGO4Q6UY18 593 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 STRADAQ7RTN6 431 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 EFL1Q7Z2Z2 1120 aaKnown RBP7.35□□□□□ -1.23
BRCA1-214ENST00000477152 GKN2Q86XP6 184 aa7.35□□□□□ -1.23
BRCA1-214ENST00000477152 XYLT1Q86Y38 959 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms