RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 CAB39LQ9H9S4 337 aa14.5□□□□□ -0.09
COL4A6-206ENST00000477085 DEC1Q9P2X7 70 aa14.5□□□□□ -0.09
COL4A6-206ENST00000477085 SMG5Q9UPR3 1016 aaKnown RBP14.5□□□□□ -0.09
COL4A6-206ENST00000477085 A0A0J9YYE9 177 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 WASH3PC4AMC7 463 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 RPP40O75818 363 aaKnown RBP14.49□□□□□ -0.09
COL4A6-206ENST00000477085 ASMTLO95671 621 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 POP4O95707 220 aaKnown RBP14.49□□□□□ -0.09
COL4A6-206ENST00000477085 CRTAMO95727 393 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 TRBC1P01850 177 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 CA4P22748 312 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 GDI1P31150 447 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 SPRP35270 261 aaPredicted RBP14.49□□□□□ -0.09
COL4A6-206ENST00000477085 HNF1BP35680 557 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 MAGEA12P43365 314 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 CSRP3P50461 194 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 CSE1LP55060 971 aaKnown RBP14.49□□□□□ -0.09
COL4A6-206ENST00000477085 THOC5Q13769 683 aaKnown RBP14.49□□□□□ -0.09
COL4A6-206ENST00000477085 CMC1Q7Z7K0 106 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 PLPP6Q8IY26 295 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 MICALL1Q8N3F8 863 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 OR6P1Q8NGX9 317 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 WFIKKN2Q8TEU8 576 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 ISL2Q96A47 359 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 VPS39Q96JC1 886 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 TUBGCP5Q96RT8 1024 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 SUV39H2Q9H5I1 410 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 RABEP2Q9H5N1 569 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 ZDHHC6Q9H6R6 413 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 MAGEE1Q9HCI5 957 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 FBRSL1Q9HCM7 1045 aaKnown RBP14.49□□□□□ -0.09
COL4A6-206ENST00000477085 BPIFA1Q9NP55 256 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 TXNDC16Q9P2K2 825 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 FBXO5Q9UKT4 447 aa14.49□□□□□ -0.09
COL4A6-206ENST00000477085 USP15Q9Y4E8 981 aaPredicted RBP14.49□□□□□ -0.09
COL4A6-206ENST00000477085 DENND4AQ7Z401 1863 aa14.48□□□□□ -0.09
COL4A6-206ENST00000477085 H3BQ06 376 aaPredicted RBP14.48□□□□□ -0.09
COL4A6-206ENST00000477085 ECI2O75521 394 aa14.48□□□□□ -0.09
COL4A6-206ENST00000477085 SLC4A1P02730 911 aa14.48□□□□□ -0.09
COL4A6-206ENST00000477085 CTSLP07711 333 aa14.48□□□□□ -0.09
COL4A6-206ENST00000477085 SRPRAP08240 638 aaKnown RBP14.48□□□□□ -0.09
COL4A6-206ENST00000477085 SERPINA4P29622 427 aa14.48□□□□□ -0.09
COL4A6-206ENST00000477085 EPHB1P54762 984 aa14.48□□□□□ -0.09
COL4A6-206ENST00000477085 RPL26P61254 145 aaKnown RBP14.48□□□□□ -0.09
COL4A6-206ENST00000477085 SEMG2Q02383 582 aa14.48□□□□□ -0.09
COL4A6-206ENST00000477085 DNAJC3Q13217 504 aa14.48□□□□□ -0.09
COL4A6-206ENST00000477085 LAMB3Q13751 1172 aa14.48□□□□□ -0.09
COL4A6-206ENST00000477085 PDE1CQ14123 709 aaPredicted RBP14.48□□□□□ -0.09
COL4A6-206ENST00000477085 GRAMD4Q6IC98 578 aa14.48□□□□□ -0.09
COL4A6-206ENST00000477085 CNSTQ6PJW8 725 aa14.48□□□□□ -0.09
COL4A6-206ENST00000477085 LYSMD3Q7Z3D4 306 aa14.48□□□□□ -0.09
COL4A6-206ENST00000477085 CILP2Q8IUL8 1156 aa14.48□□□□□ -0.09
COL4A6-206ENST00000477085 GDAP1Q8TB36 358 aa14.48□□□□□ -0.09
COL4A6-206ENST00000477085 ALKBH8Q96BT7 664 aaKnown RBP14.48□□□□□ -0.09
COL4A6-206ENST00000477085 APOPT1Q96IL0 206 aa14.48□□□□□ -0.09
COL4A6-206ENST00000477085 SLC13A1Q9BZW2 595 aa14.48□□□□□ -0.09
COL4A6-206ENST00000477085 RHOJQ9H4E5 214 aa14.48□□□□□ -0.09
COL4A6-206ENST00000477085 FBXO6Q9NRD1 293 aaPredicted RBP14.48□□□□□ -0.09
COL4A6-206ENST00000477085 POLR3BQ9NW08 1133 aaPredicted RBP14.48□□□□□ -0.09
COL4A6-206ENST00000477085 RPL26L1Q9UNX3 145 aaKnown RBP14.48□□□□□ -0.09
COL4A6-206ENST00000477085 ZNF711Q9Y462 761 aa14.48□□□□□ -0.09
COL4A6-206ENST00000477085 NUMBLQ9Y6R0 609 aa14.48□□□□□ -0.09
COL4A6-206ENST00000477085 WASF2Q9Y6W5 498 aa14.48□□□□□ -0.09
COL4A6-206ENST00000477085 PRUNE2Q8WUY3 3088 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 TMEM265A0A087WTH1 108 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 GRXCR2A6NFK2 248 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 S1PR4O95977 384 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 UGT2B4P06133 528 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 ATP5BP06576 529 aaKnown RBP14.47□□□□□ -0.09
COL4A6-206ENST00000477085 LPOP22079 712 aaPredicted RBP14.47□□□□□ -0.09
COL4A6-206ENST00000477085 ETV4P43268 484 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 CDKN1CP49918 316 aaPredicted RBP14.47□□□□□ -0.09
COL4A6-206ENST00000477085 PRAMEP78395 509 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 YAF2Q8IY57 180 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 NDUFAF2Q8N183 169 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 CPA6Q8N4T0 437 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 LRCH3Q96II8 777 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 GPR22Q99680 433 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 FAM167BQ9BTA0 163 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 TRMT61BQ9BVS5 477 aaKnown RBP14.47□□□□□ -0.09
COL4A6-206ENST00000477085 SNX15Q9NRS6 342 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 PCMTD2Q9NV79 361 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 NSMCE4AQ9NXX6 385 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 IL17CQ9P0M4 197 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 EPS15L1Q9UBC2 864 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 PPIL1Q9Y3C6 166 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 C2orf81A6NN90 581 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 A8MX80 341 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 ANHXE9PGG2 379 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 LEFTY1O75610 366 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 ASLP04424 464 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 FOXN2P32314 431 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 LEPRP48357 1165 aaKnown RBP14.47□□□□□ -0.09
COL4A6-206ENST00000477085 SOX9P48436 509 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 PDE1BQ01064 536 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 PEX6Q13608 980 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 HTR4Q13639 388 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 ARSIQ5FYB1 569 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 GDPD4Q6W3E5 623 aa14.47□□□□□ -0.09
COL4A6-206ENST00000477085 TSPAN33Q86UF1 283 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms