RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 IL36AQ9UHA7 158 aa28.92■■■□□ 2.22
VEGFA-211ENST00000476772 HCN2Q9UL51 889 aa28.92■■■□□ 2.22
VEGFA-211ENST00000476772 PHTF1Q9UMS5 762 aa28.92■■■□□ 2.22
VEGFA-211ENST00000476772 SIN3BO75182 1162 aa28.91■■■□□ 2.22
VEGFA-211ENST00000476772 BRAFP15056 766 aa28.91■■■□□ 2.22
VEGFA-211ENST00000476772 LPOP22079 712 aaPredicted RBP28.91■■■□□ 2.22
VEGFA-211ENST00000476772 ARSIQ5FYB1 569 aa28.91■■■□□ 2.22
VEGFA-211ENST00000476772 GRTP1Q5TC63 336 aa28.91■■■□□ 2.22
VEGFA-211ENST00000476772 MROH9Q5TGP6 573 aa28.91■■■□□ 2.22
VEGFA-211ENST00000476772 EMC10Q5UCC4 262 aa28.91■■■□□ 2.22
VEGFA-211ENST00000476772 NEPROQ6NW34 567 aa28.91■■■□□ 2.22
VEGFA-211ENST00000476772 LYSMD3Q7Z3D4 306 aa28.91■■■□□ 2.22
VEGFA-211ENST00000476772 C4orf33Q8N1A6 199 aa28.91■■■□□ 2.22
VEGFA-211ENST00000476772 ARFGAP2Q8N6H7 521 aa28.91■■■□□ 2.22
VEGFA-211ENST00000476772 PHF7Q9BWX1 381 aaPredicted RBP28.91■■■□□ 2.22
VEGFA-211ENST00000476772 MFSD1Q9H3U5 465 aa28.91■■■□□ 2.22
VEGFA-211ENST00000476772 SUDS3Q9H7L9 328 aaPredicted RBP28.91■■■□□ 2.22
VEGFA-211ENST00000476772 KCNK12Q9HB15 430 aa28.91■■■□□ 2.22
VEGFA-211ENST00000476772 NSMCE4AQ9NXX6 385 aa28.91■■■□□ 2.22
VEGFA-211ENST00000476772 UNC80Q8N2C7 3258 aa28.91■■■□□ 2.22
VEGFA-211ENST00000476772 COL4A2P08572 1712 aa28.91■■■□□ 2.22
VEGFA-211ENST00000476772 OR51F1A6NGY5 319 aa28.9■■■□□ 2.22
VEGFA-211ENST00000476772 CAPN8A6NHC0 703 aa28.9■■■□□ 2.22
VEGFA-211ENST00000476772 MT-ND3P03897 115 aa28.9■■■□□ 2.22
VEGFA-211ENST00000476772 CNTFP26441 200 aa28.9■■■□□ 2.22
VEGFA-211ENST00000476772 HNF1BP35680 557 aa28.9■■■□□ 2.22
VEGFA-211ENST00000476772 SLC1A2P43004 574 aa28.9■■■□□ 2.22
VEGFA-211ENST00000476772 GALK1P51570 392 aa28.9■■■□□ 2.22
VEGFA-211ENST00000476772 CTBP1Q13363 440 aa28.9■■■□□ 2.22
VEGFA-211ENST00000476772 HNRNPA1L2Q32P51 320 aaKnown RBP28.9■■■□□ 2.22
VEGFA-211ENST00000476772 ZNF470Q6ECI4 717 aa28.9■■■□□ 2.22
VEGFA-211ENST00000476772 SERPINA13PQ6UXR4 307 aa28.9■■■□□ 2.22
VEGFA-211ENST00000476772 PTAR1Q7Z6K3 402 aaPredicted RBP28.9■■■□□ 2.22
VEGFA-211ENST00000476772 MTBPQ96DY7 904 aa28.9■■■□□ 2.22
VEGFA-211ENST00000476772 SERAC1Q96JX3 654 aa28.9■■■□□ 2.22
VEGFA-211ENST00000476772 RBBP8Q99708 897 aa28.9■■■□□ 2.22
VEGFA-211ENST00000476772 TMEM245Q9H330 911 aa28.9■■■□□ 2.22
VEGFA-211ENST00000476772 ZDHHC4Q9NPG8 344 aa28.9■■■□□ 2.22
VEGFA-211ENST00000476772 EDDM13A0A1B0GTR0 161 aa28.89■■■□□ 2.22
VEGFA-211ENST00000476772 MPP1Q00013 466 aa28.89■■■□□ 2.22
VEGFA-211ENST00000476772 EGFLAMQ63HQ2 1017 aa28.89■■■□□ 2.22
VEGFA-211ENST00000476772 HLA-CQ95604 372 aa28.89■■■□□ 2.22
VEGFA-211ENST00000476772 CDKN2AIPNLQ96HQ2 116 aa28.89■■■□□ 2.22
VEGFA-211ENST00000476772 SMC6Q96SB8 1091 aa28.89■■■□□ 2.22
VEGFA-211ENST00000476772 KLF6Q99612 283 aaPredicted RBP28.89■■■□□ 2.22
VEGFA-211ENST00000476772 GPR63Q9BZJ6 419 aa28.89■■■□□ 2.22
VEGFA-211ENST00000476772 THAP10Q9P2Z0 257 aaPredicted RBP28.89■■■□□ 2.22
VEGFA-211ENST00000476772 ADAM21Q9UKJ8 722 aa28.89■■■□□ 2.22
VEGFA-211ENST00000476772 TCF20Q9UGU0 1960 aaKnown RBP28.89■■■□□ 2.22
VEGFA-211ENST00000476772 CCDC162PA2VCL2 907 aa28.89■■■□□ 2.21
VEGFA-211ENST00000476772 GOT2P00505 430 aaKnown RBP28.89■■■□□ 2.21
VEGFA-211ENST00000476772 ITGA2BP08514 1039 aa28.89■■■□□ 2.21
VEGFA-211ENST00000476772 PSMA3P25788 255 aa28.89■■■□□ 2.21
VEGFA-211ENST00000476772 IL12RB1P42701 662 aa28.89■■■□□ 2.21
VEGFA-211ENST00000476772 ABCG1P45844 678 aa28.89■■■□□ 2.21
VEGFA-211ENST00000476772 CSE1LP55060 971 aaKnown RBP28.89■■■□□ 2.21
VEGFA-211ENST00000476772 PDE1BQ01064 536 aa28.89■■■□□ 2.21
VEGFA-211ENST00000476772 NUDT18Q6ZVK8 323 aa28.89■■■□□ 2.21
VEGFA-211ENST00000476772 PLCD3Q8N3E9 789 aa28.89■■■□□ 2.21
VEGFA-211ENST00000476772 CALML6Q8TD86 181 aa28.89■■■□□ 2.21
VEGFA-211ENST00000476772 SPOCK2Q92563 424 aa28.89■■■□□ 2.21
VEGFA-211ENST00000476772 ATXN7L3BQ96GX2 97 aa28.89■■■□□ 2.21
VEGFA-211ENST00000476772 P2RY13Q9BPV8 354 aa28.89■■■□□ 2.21
VEGFA-211ENST00000476772 MCMBPQ9BTE3 642 aa28.89■■■□□ 2.21
VEGFA-211ENST00000476772 BPIFA1Q9NP55 256 aa28.89■■■□□ 2.21
VEGFA-211ENST00000476772 PPIL1Q9Y3C6 166 aa28.89■■■□□ 2.21
VEGFA-211ENST00000476772 A0A1W2PQ67 120 aa28.88■■■□□ 2.21
VEGFA-211ENST00000476772 GOLGA8RI6L899 631 aa28.88■■■□□ 2.21
VEGFA-211ENST00000476772 STX7O15400 261 aaKnown RBP28.88■■■□□ 2.21
VEGFA-211ENST00000476772 KRT4P19013 534 aa28.88■■■□□ 2.21
VEGFA-211ENST00000476772 LIMK2P53671 638 aa28.88■■■□□ 2.21
VEGFA-211ENST00000476772 C9orf64Q5T6V5 341 aa28.88■■■□□ 2.21
VEGFA-211ENST00000476772 STK40Q8N2I9 435 aa28.88■■■□□ 2.21
VEGFA-211ENST00000476772 SLC44A3Q8N4M1 653 aa28.88■■■□□ 2.21
VEGFA-211ENST00000476772 C2CD4AQ8NCU7 369 aaPredicted RBP28.88■■■□□ 2.21
VEGFA-211ENST00000476772 EID2BQ96D98 161 aa28.88■■■□□ 2.21
VEGFA-211ENST00000476772 LRIG1Q96JA1 1093 aa28.88■■■□□ 2.21
VEGFA-211ENST00000476772 ACOX2Q99424 681 aa28.88■■■□□ 2.21
VEGFA-211ENST00000476772 OSBPL1AQ9BXW6 950 aa28.88■■■□□ 2.21
VEGFA-211ENST00000476772 KCNK9Q9NPC2 374 aa28.88■■■□□ 2.21
VEGFA-211ENST00000476772 C1orf232A0A0U1RR37 186 aa28.87■■■□□ 2.21
VEGFA-211ENST00000476772 SPAG7O75391 227 aa28.87■■■□□ 2.21
VEGFA-211ENST00000476772 GABRB3P28472 473 aa28.87■■■□□ 2.21
VEGFA-211ENST00000476772 CTHP32929 405 aa28.87■■■□□ 2.21
VEGFA-211ENST00000476772 SPRP35270 261 aaPredicted RBP28.87■■■□□ 2.21
VEGFA-211ENST00000476772 CDKN3Q16667 212 aa28.87■■■□□ 2.21
VEGFA-211ENST00000476772 BRAT1Q6PJG6 821 aa28.87■■■□□ 2.21
VEGFA-211ENST00000476772 TXNDC11Q6PKC3 985 aa28.87■■■□□ 2.21
VEGFA-211ENST00000476772 OTUD6BQ8N6M0 293 aa28.87■■■□□ 2.21
VEGFA-211ENST00000476772 MDM1Q8TC05 714 aa28.87■■■□□ 2.21
VEGFA-211ENST00000476772 SCRN2Q96FV2 425 aa28.87■■■□□ 2.21
VEGFA-211ENST00000476772 LYSMD1Q96S90 227 aa28.87■■■□□ 2.21
VEGFA-211ENST00000476772 SRPK1Q96SB4 655 aaKnown RBP28.87■■■□□ 2.21
VEGFA-211ENST00000476772 ZFYVE1Q9HBF4 777 aa28.87■■■□□ 2.21
VEGFA-211ENST00000476772 IL17CQ9P0M4 197 aa28.87■■■□□ 2.21
VEGFA-211ENST00000476772 MARCH4Q9P2E8 410 aaPredicted RBP28.87■■■□□ 2.21
VEGFA-211ENST00000476772 FBXO5Q9UKT4 447 aa28.87■■■□□ 2.21
VEGFA-211ENST00000476772 TMEM120BA0PK00 339 aa28.86■■■□□ 2.21
VEGFA-211ENST00000476772 NPIPB15A6NHN6 443 aaPredicted RBP28.86■■■□□ 2.21
VEGFA-211ENST00000476772 SPECC1L-ADORA2AF8WAN1 911 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms