RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 RINT1Q6NUQ1 792 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 ARHGAP11AQ6P4F7 1023 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 TMEM81Q6P7N7 255 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 BRAT1Q6PJG6 821 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 ZDHHC24Q6UX98 284 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 KIAA1324Q6UXG2 1013 aaKnown RBP4.17□□□□□ -1.74
CD55-208ENST00000476590 RNF207Q6ZRF8 634 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 USP49Q70CQ1 688 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 NEK8Q86SG6 692 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 KIF18BQ86Y91 864 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 ZC3H7AQ8IWR0 971 aaKnown RBP4.17□□□□□ -1.74
CD55-208ENST00000476590 PHC2Q8IXK0 858 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 DCP1BQ8IZD4 617 aaKnown RBP4.17□□□□□ -1.74
CD55-208ENST00000476590 ZCCHC7Q8N3Z6 543 aaKnown RBP4.17□□□□□ -1.74
CD55-208ENST00000476590 RASGEF1CQ8N431 466 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 SLC25A41Q8N5S1 370 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 ARFGAP1Q8N6T3 406 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 CCDC185Q8N715 623 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 ZNF527Q8NB42 609 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 SLC37A3Q8NCC5 494 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 ZBTB44Q8NCP5 570 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 GSTCDQ8NEC7 633 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 ABHD11Q8NFV4 315 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 OR52K1Q8NGK4 314 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 TCP10LQ8TDR4 215 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 DEPDC1BQ8WUY9 529 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 C7orf43Q8WVR3 580 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 SHC3Q92529 594 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 SLC22A18Q96BI1 424 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 PPP1R36Q96LQ0 422 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 ZNF512Q96ME7 567 aaPredicted RBP4.17□□□□□ -1.74
CD55-208ENST00000476590 CAMKK2Q96RR4 588 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 NTMT1Q9BV86 223 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 NPLQ9BXD5 320 aaPredicted RBP4.17□□□□□ -1.74
CD55-208ENST00000476590 NYXQ9GZU5 481 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 RHBGQ9H310 441 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 STN1Q9H668 368 aaKnown RBP4.17□□□□□ -1.74
CD55-208ENST00000476590 RANBP3Q9H6Z4 567 aaPredicted RBP4.17□□□□□ -1.74
CD55-208ENST00000476590 ELAC1Q9H777 363 aaKnown RBP4.17□□□□□ -1.74
CD55-208ENST00000476590 SLCO1B3Q9NPD5 702 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 ARHGAP20Q9P2F6 1191 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 KANSL3Q9P2N6 904 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 APEX2Q9UBZ4 518 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 ARMCX3Q9UH62 379 aaPredicted RBP4.17□□□□□ -1.74
CD55-208ENST00000476590 AGTPBP1Q9UPW5 1226 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 TLR6Q9Y2C9 796 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 CHTOPQ9Y3Y2 248 aaKnown RBP4.17□□□□□ -1.74
CD55-208ENST00000476590 DMRT1Q9Y5R6 373 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 KIAA1210Q9ULL0 1709 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 A0A1B0GTW7 788 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 SSU72P8A0A1W2PR75 194 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 FAM221AA4D161 298 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 RRN3P2A6NIE6 340 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 ACOD1A6NK06 481 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 PDZK1P1A8MUH7 402 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 I3L521 148 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 UBXN8O00124 270 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 PDHXO00330 501 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 FCHO1O14526 889 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 PRPF4O43172 522 aaKnown RBP eCLIP4.16□□□□□ -1.74
CD55-208ENST00000476590 CYP26A1O43174 497 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 CHMP2AO43633 222 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 ZNF780AO75290 641 aaPredicted RBP4.16□□□□□ -1.74
CD55-208ENST00000476590 CRTAPO75718 401 aaPredicted RBP4.16□□□□□ -1.74
CD55-208ENST00000476590 CDC123O75794 336 aaPredicted RBP4.16□□□□□ -1.74
CD55-208ENST00000476590 IDH1O75874 414 aaKnown RBP4.16□□□□□ -1.74
CD55-208ENST00000476590 PRKD3O94806 890 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 APOL3O95236 402 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 CNOT4O95628 575 aaKnown RBP4.16□□□□□ -1.74
CD55-208ENST00000476590 BMP15O95972 392 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 PTTG1O95997 202 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 S100A9P06702 114 aaKnown RBP4.16□□□□□ -1.74
CD55-208ENST00000476590 PRG2P13727 222 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 FDPSP14324 419 aaKnown RBP4.16□□□□□ -1.74
CD55-208ENST00000476590 PTPN1P18031 435 aaKnown RBP4.16□□□□□ -1.74
CD55-208ENST00000476590 SLC9A1P19634 815 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 HMGCLP35914 325 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 GSTM5P46439 218 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 GNPDA1P46926 289 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 RAB13P51153 203 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 PRKAA2P54646 552 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 PSMD4P55036 377 aaKnown RBP4.16□□□□□ -1.74
CD55-208ENST00000476590 DCDC1P59894 354 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 UBE2IP63279 158 aaKnown RBP4.16□□□□□ -1.74
CD55-208ENST00000476590 RPP30P78346 268 aaKnown RBP4.16□□□□□ -1.74
CD55-208ENST00000476590 KCNAB2Q13303 367 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 CAPRIN1Q14444 709 aaKnown RBP4.16□□□□□ -1.74
CD55-208ENST00000476590 ZNF273Q14593 569 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 RRP1BQ14684 758 aaKnown RBP4.16□□□□□ -1.74
CD55-208ENST00000476590 KCNAB1Q14722 419 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 ODF1Q14990 250 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 HLFQ16534 295 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 RUNDC3AQ59EK9 446 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 XKR3Q5GH77 459 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 KIAA1755Q5JYT7 1200 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 ZBTB37Q5TC79 503 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 KANK2Q63ZY3 851 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 TYW3Q6IPR3 259 aaKnown RBP4.16□□□□□ -1.74
CD55-208ENST00000476590 FUT10Q6P4F1 479 aa4.16□□□□□ -1.74
CD55-208ENST00000476590 CFAP77Q6ZQR2 320 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms