RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 ZNF626Q68DY1 528 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 LINC00346Q8IVM7 164 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 MB21D2Q8IYB1 491 aaPredicted RBP6.11□□□□□ -1.43
VPS50-212ENST00000476413 CCDC13Q8IYE1 715 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 HJURPQ8NCD3 748 aaPredicted RBP6.11□□□□□ -1.43
VPS50-212ENST00000476413 C16orf52Q8NHV5 167 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 SLC35F5Q8WV83 523 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 IGSF8Q969P0 613 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 ERGIC1Q969X5 290 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 ZG16BQ96DA0 208 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 TMEM68Q96MH6 324 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 TMEM47Q9BQJ4 181 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 TMPRSS5Q9H3S3 457 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 ESRP2Q9H6T0 727 aaKnown RBP6.11□□□□□ -1.43
VPS50-212ENST00000476413 MKKSQ9NPJ1 570 aaPredicted RBP6.11□□□□□ -1.43
VPS50-212ENST00000476413 NENFQ9UMX5 172 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 FRMD4BQ9Y2L6 1034 aa6.11□□□□□ -1.43
VPS50-212ENST00000476413 ADAM20O43506 726 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 ZNF500O60304 480 aaPredicted RBP6.1□□□□□ -1.43
VPS50-212ENST00000476413 CBSLP0DN79 551 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 MYF6P23409 242 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 CBSP35520 551 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 NNMTP40261 264 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 CAMPP49913 170 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 GALCP54803 685 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 SORDQ00796 357 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 NAE1Q13564 534 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 PCLAFQ15004 111 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 ZNF284Q2VY69 593 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 MFSD4BQ5TF39 518 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 PARM1Q6UWI2 310 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 TMCO3Q6UWJ1 677 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 MTSS1LQ765P7 747 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 IL17RCQ8NAC3 791 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 C1orf131Q8NDD1 294 aaKnown RBP6.1□□□□□ -1.43
VPS50-212ENST00000476413 OR14L1PQ8NHC6 308 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 PRSS3P2Q8NHM4 247 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 ARRDC2Q8TBH0 407 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 PIGOQ8TEQ8 1089 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 SEPT5Q99719 369 aaPredicted RBP6.1□□□□□ -1.43
VPS50-212ENST00000476413 TRMOQ9BU70 441 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 KCNN2Q9H2S1 579 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 CLK4Q9HAZ1 481 aaKnown RBP6.1□□□□□ -1.43
VPS50-212ENST00000476413 ZBTB40Q9NUA8 1239 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 TUBA8Q9NY65 449 aaPredicted RBP6.1□□□□□ -1.43
VPS50-212ENST00000476413 CISD1Q9NZ45 108 aaKnown RBP6.1□□□□□ -1.43
VPS50-212ENST00000476413 OGFRQ9NZT2 677 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 BTBD3Q9Y2F9 522 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 STON1Q9Y6Q2 735 aa6.1□□□□□ -1.43
VPS50-212ENST00000476413 A0A1W2PR77 199 aa6.09□□□□□ -1.43
VPS50-212ENST00000476413 OR2A25A4D2G3 310 aa6.09□□□□□ -1.43
VPS50-212ENST00000476413 SYNDIG1LA6NDD5 238 aa6.09□□□□□ -1.43
VPS50-212ENST00000476413 TMEM202A6NGA9 273 aa6.09□□□□□ -1.43
VPS50-212ENST00000476413 SH2B2O14492 632 aaPredicted RBP6.09□□□□□ -1.43
VPS50-212ENST00000476413 SLC15A1P46059 708 aa6.09□□□□□ -1.43
VPS50-212ENST00000476413 P2RX3P56373 397 aa6.09□□□□□ -1.43
VPS50-212ENST00000476413 IRX6P78412 446 aaPredicted RBP6.09□□□□□ -1.43
VPS50-212ENST00000476413 ADORA2A-AS1P86434 159 aa6.09□□□□□ -1.43
VPS50-212ENST00000476413 ITGADQ13349 1161 aa6.09□□□□□ -1.43
VPS50-212ENST00000476413 ADIPOQQ15848 244 aa6.09□□□□□ -1.43
VPS50-212ENST00000476413 PCGF3Q3KNV8 242 aa6.09□□□□□ -1.43
VPS50-212ENST00000476413 LRIF1Q5T3J3 769 aa6.09□□□□□ -1.43
VPS50-212ENST00000476413 MORN5Q5VZ52 161 aa6.09□□□□□ -1.43
VPS50-212ENST00000476413 CRELD2Q6UXH1 353 aaPredicted RBP6.09□□□□□ -1.43
VPS50-212ENST00000476413 DLK2Q6UY11 383 aa6.09□□□□□ -1.43
VPS50-212ENST00000476413 KRT74Q7RTS7 529 aa6.09□□□□□ -1.43
VPS50-212ENST00000476413 PATL1Q86TB9 770 aaKnown RBP6.09□□□□□ -1.43
VPS50-212ENST00000476413 PRPF39Q86UA1 669 aaKnown RBP6.09□□□□□ -1.43
VPS50-212ENST00000476413 SRRM1Q8IYB3 904 aaKnown RBP6.09□□□□□ -1.43
VPS50-212ENST00000476413 GABPB2Q8TAK5 448 aaPredicted RBP6.09□□□□□ -1.43
VPS50-212ENST00000476413 MPLKIPQ8TAP9 179 aa6.09□□□□□ -1.43
VPS50-212ENST00000476413 SLC22A18Q96BI1 424 aa6.09□□□□□ -1.43
VPS50-212ENST00000476413 TXLNGYQ9BZA5 131 aa6.09□□□□□ -1.43
VPS50-212ENST00000476413 PLK3Q9H4B4 646 aa6.09□□□□□ -1.43
VPS50-212ENST00000476413 SIRT3Q9NTG7 399 aaPredicted RBP6.09□□□□□ -1.43
VPS50-212ENST00000476413 TRNAU1APQ9NX07 287 aaKnown RBP6.09□□□□□ -1.43
VPS50-212ENST00000476413 CHORDC1Q9UHD1 332 aaPredicted RBP6.09□□□□□ -1.43
VPS50-212ENST00000476413 PADI1Q9ULC6 663 aa6.09□□□□□ -1.43
VPS50-212ENST00000476413 ARHGEF40Q8TER5 1519 aa6.09□□□□□ -1.44
VPS50-212ENST00000476413 J3KR12 359 aa6.08□□□□□ -1.44
VPS50-212ENST00000476413 PAPSS1O43252 624 aaPredicted RBP6.08□□□□□ -1.44
VPS50-212ENST00000476413 CYC1P08574 325 aa6.08□□□□□ -1.44
VPS50-212ENST00000476413 PRF1P14222 555 aa6.08□□□□□ -1.44
VPS50-212ENST00000476413 ACADLP28330 430 aa6.08□□□□□ -1.44
VPS50-212ENST00000476413 RFX5P48382 616 aaPredicted RBP6.08□□□□□ -1.44
VPS50-212ENST00000476413 HSD17B4P51659 736 aa6.08□□□□□ -1.44
VPS50-212ENST00000476413 HMGA2P52926 109 aa6.08□□□□□ -1.44
VPS50-212ENST00000476413 TRAF1Q13077 416 aa6.08□□□□□ -1.44
VPS50-212ENST00000476413 IKQ13123 557 aaPredicted RBP6.08□□□□□ -1.44
VPS50-212ENST00000476413 RBMS2Q15434 407 aaKnown RBP6.08□□□□□ -1.44
VPS50-212ENST00000476413 MMEL1Q495T6 779 aa6.08□□□□□ -1.44
VPS50-212ENST00000476413 MTX3Q5HYI7 312 aa6.08□□□□□ -1.44
VPS50-212ENST00000476413 SHC4Q6S5L8 630 aa6.08□□□□□ -1.44
VPS50-212ENST00000476413 PQLC2Q6ZP29 291 aa6.08□□□□□ -1.44
VPS50-212ENST00000476413 Q6ZSV7 163 aa6.08□□□□□ -1.44
VPS50-212ENST00000476413 TSPAN33Q86UF1 283 aa6.08□□□□□ -1.44
VPS50-212ENST00000476413 ARFGAP1Q8N6T3 406 aa6.08□□□□□ -1.44
VPS50-212ENST00000476413 POC5Q8NA72 575 aa6.08□□□□□ -1.44
VPS50-212ENST00000476413 ZNF548Q8NEK5 533 aaPredicted RBP6.08□□□□□ -1.44
VPS50-212ENST00000476413 RRNAD1Q96FB5 475 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms