RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 C2P06681 752 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 MAGP20916 626 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 CCNCP24863 283 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 NMBRP28336 390 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 ESRRGP62508 458 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 PIGFQ07326 219 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 XKR4Q5GH76 650 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 GRTP1Q5TC63 336 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 PPP2R2DQ66LE6 453 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 ZBTB49Q6ZSB9 765 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 EPHX4Q8IUS5 362 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 CYGBQ8WWM9 190 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 MIR1-1HGQ9H1L0 117 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 NANOGQ9H9S0 305 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 LTB4R2Q9NPC1 389 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 QPCTLQ9NXS2 382 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 KCTD5Q9NXV2 234 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 RCOR3Q9P2K3 495 aaPredicted RBP8.42□□□□□ -1.06
VAPB-205ENST00000476395 SNX10Q9Y5X0 201 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 CACNG3O60359 315 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 MAN1A2O60476 641 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 ESRRBO95718 433 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 AP2A1O95782 977 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 HSPA8P11142 646 aaKnown RBP8.42□□□□□ -1.06
VAPB-205ENST00000476395 HOXD8P13378 290 aaPredicted RBP8.42□□□□□ -1.06
VAPB-205ENST00000476395 TUBA1BP68363 451 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 BFSP2Q13515 415 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 PTK2BQ14289 1009 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 ZNF460Q14592 562 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 GRM3Q14832 879 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 ZNF484Q5JVG2 852 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 IL31Q6EBC2 164 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 C8orf82Q6P1X6 216 aaPredicted RBP8.42□□□□□ -1.06
VAPB-205ENST00000476395 TUBA1AQ71U36 451 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 STRA8Q7Z7C7 330 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 CNTD1Q8N815 330 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 ASIC4Q96FT7 647 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 VPS45Q9NRW7 570 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 RIC8BQ9NVN3 520 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 CNOT6Q9ULM6 557 aaKnown RBP8.42□□□□□ -1.06
VAPB-205ENST00000476395 FIS1Q9Y3D6 152 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 TRAF6Q9Y4K3 522 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 SQORQ9Y6N5 450 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 A0A096LPK6 155 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 A0A0B4J203 849 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 PRORSD1PA6NEY8 169 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 PFDN6O15212 129 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 AKAP10O43572 662 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 HSPA4LO95757 839 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 MAP4P27816 1152 aaKnown RBP8.41□□□□□ -1.06
VAPB-205ENST00000476395 GJA5P36382 358 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 BMPR1AP36894 532 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 PRKCQQ04759 706 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 OXA1LQ15070 435 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 ARL13BQ3SXY8 428 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 SPANXN3Q5MJ09 141 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 UBXN11Q5T124 520 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 DENND5AQ6IQ26 1287 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 RWDD4Q6NW29 188 aaKnown RBP8.41□□□□□ -1.06
VAPB-205ENST00000476395 CASC4Q6P4E1 433 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 FIP1L1Q6UN15 594 aaKnown RBP8.41□□□□□ -1.06
VAPB-205ENST00000476395 UNC93AQ86WB7 457 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 TDRD5Q8NAT2 981 aaKnown RBP8.41□□□□□ -1.06
VAPB-205ENST00000476395 KDM1BQ8NB78 822 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 URGCPQ8TCY9 931 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 TFAP2CQ92754 450 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 SLC45A3Q96JT2 553 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 CACNG4Q9UBN1 327 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 NRCAMQ92823 1304 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 TMEM114B3SHH9 223 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 ADM5C9JUS6 153 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 XYLBO75191 536 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 MT-CO1P00395 513 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 ACAT1P24752 427 aaKnown RBP8.41□□□□□ -1.06
VAPB-205ENST00000476395 TYK2P29597 1187 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 ARCN1P48444 511 aaKnown RBP8.41□□□□□ -1.06
VAPB-205ENST00000476395 ADIGQ0VDE8 80 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 EIF4EBP2Q13542 120 aaPredicted RBP8.41□□□□□ -1.06
VAPB-205ENST00000476395 IHHQ14623 411 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 GPR162Q16538 588 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 MOGQ16653 247 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 ARL13AQ5H913 290 aaPredicted RBP8.41□□□□□ -1.06
VAPB-205ENST00000476395 UNC5DQ6UXZ4 953 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 ZC3HC1Q86WB0 502 aaKnown RBP8.41□□□□□ -1.06
VAPB-205ENST00000476395 DEPDC4Q8N2C3 294 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 LRRC52Q8N7C0 313 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 CATSPER1Q8NEC5 780 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 ZMIZ2Q8NF64 920 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 LPGAT1Q92604 370 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 EMID1Q96A84 441 aaPredicted RBP8.41□□□□□ -1.06
VAPB-205ENST00000476395 GPR22Q99680 433 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 ANKRD60Q9BZ19 345 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 GDAP2Q9NXN4 497 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.41□□□□□ -1.06
VAPB-205ENST00000476395 ADAM28Q9UKQ2 775 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 SLC8A2Q9UPR5 921 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 HHLA1C9JL84 531 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 AURKAO14965 403 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 DAB1O75553 588 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 MYCP01106 439 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms