RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 IL2P60568 153 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 TXNL4AP83876 142 aaKnown RBP11.55□□□□□ -0.56
U2AF1-209ENST00000475639 FASTKQ14296 549 aaKnown RBP11.55□□□□□ -0.56
U2AF1-209ENST00000475639 SF3B4Q15427 424 aaKnown RBP eCLIP11.55□□□□□ -0.56
U2AF1-209ENST00000475639 C1orf220Q5T0J3 134 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 DRICH1Q6PGQ1 229 aaPredicted RBP11.55□□□□□ -0.56
U2AF1-209ENST00000475639 ZNF621Q6ZSS3 439 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 CXXC5Q7LFL8 322 aaKnown RBP11.55□□□□□ -0.56
U2AF1-209ENST00000475639 ZBTB46Q86UZ6 589 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 SHC3Q92529 594 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 ABCB10Q9NRK6 738 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 VPS28Q9UK41 221 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 A0A1W2PPW3 197 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 TCRBV7S3A2A0A539 114 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 TCRBV9S1A1TA0A576 114 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 SEC22BO75396 215 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 PROSCO94903 275 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 ZNF7P17097 686 aaPredicted RBP11.55□□□□□ -0.56
U2AF1-209ENST00000475639 MSX2P35548 267 aaPredicted RBP11.55□□□□□ -0.56
U2AF1-209ENST00000475639 ARF3P61204 181 aaPredicted RBP11.55□□□□□ -0.56
U2AF1-209ENST00000475639 TUBA4AP68366 448 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 ARF1P84077 181 aaKnown RBP11.55□□□□□ -0.56
U2AF1-209ENST00000475639 BAATQ14032 418 aaPredicted RBP11.55□□□□□ -0.56
U2AF1-209ENST00000475639 ATG14Q6ZNE5 492 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 TRMT11Q7Z4G4 463 aaKnown RBP11.55□□□□□ -0.56
U2AF1-209ENST00000475639 CARM1Q86X55 608 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 PHTF2Q8N3S3 785 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 Q96MT0 163 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 GSDMCQ9BYG8 508 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 CIPCQ9C0C6 399 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 DSN1Q9H410 356 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 CCDC59Q9P031 241 aaKnown RBP11.55□□□□□ -0.56
U2AF1-209ENST00000475639 GNPTGQ9UJJ9 305 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 C3orf18Q9UK00 162 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 ZNF222Q9UK12 451 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 E7ESA3 106 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 NCAM2O15394 837 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 HBP1O60381 514 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 PGK1P00558 417 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 NR2F6P10588 404 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 BMP7P18075 431 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 ACAT1P24752 427 aaKnown RBP11.55□□□□□ -0.56
U2AF1-209ENST00000475639 IL12AP29459 219 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 PBLDP30039 288 aaPredicted RBP11.55□□□□□ -0.56
U2AF1-209ENST00000475639 MTAPQ13126 283 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 FAM209AQ5JX71 171 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 PYHIN1Q6K0P9 492 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 LYSMD3Q7Z3D4 306 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 MAVSQ7Z434 540 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 RAVER1Q8IY67 606 aaKnown RBP11.55□□□□□ -0.56
U2AF1-209ENST00000475639 MEIOBQ8N635 442 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 MAGEE2Q8TD90 523 aaPredicted RBP11.55□□□□□ -0.56
U2AF1-209ENST00000475639 DLG3Q92796 817 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 APOL2Q9BQE5 337 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 CHCHD6Q9BRQ6 235 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 EHD1Q9H4M9 534 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 RPF2Q9H7B2 306 aaKnown RBP11.55□□□□□ -0.56
U2AF1-209ENST00000475639 SLC9A8Q9Y2E8 581 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 FAM189A1O60320 539 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 LYPLA1O75608 230 aaPredicted RBP11.54□□□□□ -0.56
U2AF1-209ENST00000475639 EGFRP00533 1210 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 TCF7P36402 384 aaPredicted RBP11.54□□□□□ -0.56
U2AF1-209ENST00000475639 GP5P40197 560 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 BNIP3Q12983 259 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 NR1D2Q14995 579 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 EMC2Q15006 297 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 SLC15A2Q16348 729 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 FAM187BQ17R55 369 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 TFDP3Q5H9I0 405 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 NOTUMQ6P988 496 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 PLET1Q6UQ28 207 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 HIPK1Q86Z02 1210 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 MCOLN2Q8IZK6 566 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 NAT8LQ8N9F0 302 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 OR56A4Q8NGH8 313 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 TAMM41Q96BW9 452 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 REPS1Q96D71 796 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 TARS2Q9BW92 718 aaKnown RBP11.54□□□□□ -0.56
U2AF1-209ENST00000475639 PDGFCQ9NRA1 345 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 NDOR1Q9UHB4 597 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 MAPRE3Q9UPY8 281 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 IQCMA0A1B0GVH7 501 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 A0A1W2PQ67 120 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 RRN3P2A6NIE6 340 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 H3BMQ9 156 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 ZNF701M0R085 212 aaPredicted RBP11.54□□□□□ -0.56
U2AF1-209ENST00000475639 ENTPD3O75355 529 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 C8BP07358 591 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 CHRNGP07510 517 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 STAG3L1P0CL83 205 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 HSD3B2P26439 372 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 STRIP1Q5VSL9 837 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 PIK3C3Q8NEB9 887 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 PJA1Q8NG27 643 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 NEK7Q8TDX7 302 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 C18orf25Q96B23 403 aaPredicted RBP11.54□□□□□ -0.56
U2AF1-209ENST00000475639 ELMO3Q96BJ8 720 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 SPACA7Q96KW9 195 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 COG8Q96MW5 612 aa11.54□□□□□ -0.56
U2AF1-209ENST00000475639 PCDH9Q9HC56 1237 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms