RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 SPTBN2O15020 2390 aa16.28■□□□□ 0.2
SRM-204ENST00000475189 ARID1BQ8NFD5 2236 aaPredicted RBP16.27■□□□□ 0.2
SRM-204ENST00000475189 A0A0J9YYE9 177 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 TCRBV7S2A1N4TA0A589 114 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 GOLGA6L9A6NEM1 432 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 RECQL5O94762 991 aaPredicted RBP16.27■□□□□ 0.2
SRM-204ENST00000475189 HEXIM1O94992 359 aaKnown RBP16.27■□□□□ 0.2
SRM-204ENST00000475189 MT-CYBP00156 380 aaPredicted RBP16.27■□□□□ 0.2
SRM-204ENST00000475189 TRBC1P01850 177 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 NFKB1P19838 968 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 LHCGRP22888 699 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 HNF1BP35680 557 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 CCT8P50990 548 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 EPHB1P54762 984 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 PFN3P60673 137 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 RPL26P61254 145 aaKnown RBP16.27■□□□□ 0.2
SRM-204ENST00000475189 FOXK2Q01167 660 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 LRRC14Q15048 493 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 IRF4Q15306 451 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 DBX2Q6ZNG2 339 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 USP45Q70EL2 814 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 PID1Q7Z2X4 250 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 TSPAN33Q86UF1 283 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 DCP2Q8IU60 420 aaKnown RBP16.27■□□□□ 0.2
SRM-204ENST00000475189 REXO1L1PQ8IX06 675 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 NDUFAF2Q8N183 169 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 TTC13Q8NBP0 860 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 LPCAT1Q8NF37 534 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 TRIM58Q8NG06 486 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 COQ10AQ96MF6 247 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 KLHL8Q9P2G9 620 aaPredicted RBP16.27■□□□□ 0.2
SRM-204ENST00000475189 RPL26L1Q9UNX3 145 aaKnown RBP16.27■□□□□ 0.2
SRM-204ENST00000475189 R3HDM2Q9Y2K5 976 aaKnown RBP16.27■□□□□ 0.2
SRM-204ENST00000475189 PCDHGB2Q9Y5G2 931 aa16.27■□□□□ 0.2
SRM-204ENST00000475189 A0A0U1RQS6 177 aa16.26■□□□□ 0.19
SRM-204ENST00000475189 SH3BP5O60239 455 aa16.26■□□□□ 0.19
SRM-204ENST00000475189 CSRP1P21291 193 aaKnown RBP16.26■□□□□ 0.19
SRM-204ENST00000475189 RABIFP47224 123 aa16.26■□□□□ 0.19
SRM-204ENST00000475189 RXRGP48443 463 aa16.26■□□□□ 0.19
SRM-204ENST00000475189 IL9RQ01113 521 aa16.26■□□□□ 0.19
SRM-204ENST00000475189 SLC14A2Q15849 920 aa16.26■□□□□ 0.19
SRM-204ENST00000475189 TPRG1LQ5T0D9 272 aa16.26■□□□□ 0.19
SRM-204ENST00000475189 SEL1L2Q5TEA6 688 aa16.26■□□□□ 0.19
SRM-204ENST00000475189 DARS2Q6PI48 645 aaKnown RBP16.26■□□□□ 0.19
SRM-204ENST00000475189 CRTC1Q6UUV9 634 aa16.26■□□□□ 0.19
SRM-204ENST00000475189 DGLUCYQ7Z3D6 616 aa16.26■□□□□ 0.19
SRM-204ENST00000475189 CDKL3Q8IVW4 592 aaPredicted RBP16.26■□□□□ 0.19
SRM-204ENST00000475189 OXR1Q8N573 874 aa16.26■□□□□ 0.19
SRM-204ENST00000475189 TRIB3Q96RU7 358 aa16.26■□□□□ 0.19
SRM-204ENST00000475189 TLR10Q9BXR5 811 aa16.26■□□□□ 0.19
SRM-204ENST00000475189 USP29Q9HBJ7 922 aa16.26■□□□□ 0.19
SRM-204ENST00000475189 TRHDEQ9UKU6 1024 aa16.26■□□□□ 0.19
SRM-204ENST00000475189 CACNA1AO00555 2505 aa16.26■□□□□ 0.19
SRM-204ENST00000475189 SPTY2D1-AS1A0A0U1RR47 76 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 CAPN8A6NHC0 703 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 GOLGA8CPA6NN73 597 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 ANKRD66B4E2M5 251 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 PSMD11O00231 422 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 TOR1BO14657 336 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 PCDHGA12O60330 932 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 KCNK5O95279 499 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 ARRB1P49407 418 aaPredicted RBP16.25■□□□□ 0.19
SRM-204ENST00000475189 YPEL5P62699 121 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 BNIP3Q12983 259 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 ARHGEF7Q14155 803 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 FZD2Q14332 565 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 ACOX1Q15067 660 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 QPCTQ16769 361 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 DENND2CQ68D51 928 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 KDELC2Q7Z4H8 507 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 HSD11B1LQ7Z5J1 315 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 PLA2G15Q8NCC3 412 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 DEFB124Q8NES8 71 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 FCRL5Q96RD9 977 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 CARD9Q9H257 536 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 UBP1Q9NZI7 540 aa16.25■□□□□ 0.19
SRM-204ENST00000475189 LRP4O75096 1905 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 F5H423 210 aaPredicted RBP16.24■□□□□ 0.19
SRM-204ENST00000475189 GIPC1O14908 333 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 YKT6O15498 198 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 KCNN4O15554 427 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 ZSCAN12O43309 604 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 PMPCBO75439 489 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 PCCBP05166 539 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 EPHA8P29322 1005 aaPredicted RBP16.24■□□□□ 0.19
SRM-204ENST00000475189 PTSQ03393 145 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 CDK18Q07002 472 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 PDE1CQ14123 709 aaPredicted RBP16.24■□□□□ 0.19
SRM-204ENST00000475189 GALNT3Q14435 633 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 INPP5AQ14642 412 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 SUZ12Q15022 739 aaKnown RBP16.24■□□□□ 0.19
SRM-204ENST00000475189 PCSK7Q16549 785 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 PPM1JQ5JR12 505 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 LRRC66Q68CR7 880 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 KDELC1Q6UW63 502 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 TECPR1Q7Z6L1 1165 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 SLC13A5Q86YT5 568 aaPredicted RBP16.24■□□□□ 0.19
SRM-204ENST00000475189 NAXDQ8IW45 347 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 PELI3Q8N2H9 469 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 SLC35B2Q8TB61 432 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms