RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, human

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-219	ENST00000474042	SPRED1	Q7Z699	444 aa		13.44	□□□□□ -0.26
COPS7B-219	ENST00000474042	SFTPA2	Q8IWL1	248 aa		13.44	□□□□□ -0.26
COPS7B-219	ENST00000474042	PELI3	Q8N2H9	469 aa		13.44	□□□□□ -0.26
COPS7B-219	ENST00000474042	FNIP1	Q8TF40	1166 aa		13.44	□□□□□ -0.26
COPS7B-219	ENST00000474042	MED8	Q96G25	268 aa		13.44	□□□□□ -0.26
COPS7B-219	ENST00000474042	SP110	Q9HB58	689 aa		13.44	□□□□□ -0.26
COPS7B-219	ENST00000474042	MRPL40	Q9NQ50	206 aa	Known RBP	13.44	□□□□□ -0.26
COPS7B-219	ENST00000474042	PARVA	Q9NVD7	372 aa		13.44	□□□□□ -0.26
COPS7B-219	ENST00000474042	MYO6	Q9UM54	1294 aa		13.44	□□□□□ -0.26
COPS7B-219	ENST00000474042	CCDC172	P0C7W6	258 aa		13.43	□□□□□ -0.26
COPS7B-219	ENST00000474042	ATP1A3	P13637	1013 aa		13.43	□□□□□ -0.26
COPS7B-219	ENST00000474042	HGF	P14210	728 aa		13.43	□□□□□ -0.26
COPS7B-219	ENST00000474042	KEL	P23276	732 aa		13.43	□□□□□ -0.26
COPS7B-219	ENST00000474042	AP1S1	P61966	158 aa		13.43	□□□□□ -0.26
COPS7B-219	ENST00000474042	DPYS	Q14117	519 aa		13.43	□□□□□ -0.26
COPS7B-219	ENST00000474042	C14orf28	Q4W4Y0	310 aa		13.43	□□□□□ -0.26
COPS7B-219	ENST00000474042	TAF8	Q7Z7C8	310 aa		13.43	□□□□□ -0.26
COPS7B-219	ENST00000474042	PSTK	Q8IV42	348 aa	Known RBP	13.43	□□□□□ -0.26
COPS7B-219	ENST00000474042	SLITRK4	Q8IW52	837 aa		13.43	□□□□□ -0.26
COPS7B-219	ENST00000474042	COQ10A	Q96MF6	247 aa		13.43	□□□□□ -0.26
COPS7B-219	ENST00000474042	PSKH2	Q96QS6	385 aa		13.43	□□□□□ -0.26
COPS7B-219	ENST00000474042	LGR4	Q9BXB1	951 aa		13.43	□□□□□ -0.26
COPS7B-219	ENST00000474042	TRIM7	Q9C029	511 aa		13.43	□□□□□ -0.26
COPS7B-219	ENST00000474042	TMEM168	Q9H0V1	697 aa		13.43	□□□□□ -0.26
COPS7B-219	ENST00000474042	WDR26	Q9H7D7	661 aa		13.43	□□□□□ -0.26
COPS7B-219	ENST00000474042	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.43	□□□□□ -0.26
COPS7B-219	ENST00000474042	LOXL2	Q9Y4K0	774 aa		13.43	□□□□□ -0.26
COPS7B-219	ENST00000474042	RNF215	Q9Y6U7	377 aa		13.43	□□□□□ -0.26
COPS7B-219	ENST00000474042	PRSS38	A1L453	326 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	TMEM191C	A6NGB0	347 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042		B4DGG1	531 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042		B8ZZF3	427 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	DFFA	O00273	331 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	NVL	O15381	856 aa	Known RBP	13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	HTRA2	O43464	458 aa	Predicted RBP	13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	NUDT21	O43809	227 aa	Known RBP	13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	SOCS5	O75159	536 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	LRCH4	O75427	683 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	LIPC	P11150	499 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	MYCLP1	P12525	358 aa	Predicted RBP	13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	CR2	P20023	1033 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	MIP	P30301	263 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	HCAR3	P49019	387 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	ZNF135	P52742	658 aa	Predicted RBP	13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	POLR2L	P62875	67 aa	Known RBP	13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	TMCO4	Q5TGY1	634 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	SPECC1L	Q69YQ0	1117 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	SASS6	Q6UVJ0	657 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	TMPRSS9	Q7Z410	1059 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	C17orf82	Q86X59	251 aa	Predicted RBP	13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	JAML	Q86YT9	394 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	TP53INP2	Q8IXH6	220 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	FAM46D	Q8NEK8	389 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	CCL4L1	Q8NHW4	92 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	TMEM159	Q96B96	161 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	ZNF599	Q96NL3	588 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	B4GALT6	Q9UBX8	382 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	PISD	Q9UG56	409 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	SEPT3	Q9UH03	358 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	PCSK1N	Q9UHG2	260 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	MYO18B	Q8IUG5	2567 aa		13.42	□□□□□ -0.26
COPS7B-219	ENST00000474042	PIEZO2	Q9H5I5	2752 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	TMCO5B	A8MYB1	307 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	DAPK3	O43293	454 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	PRPSAP2	O60256	369 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	RNF8	O76064	485 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	PEX11B	O96011	259 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	JMJD7	P0C870	316 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	ITIH1	P19827	911 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	TNFAIP3	P21580	790 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	ETV5	P41161	510 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	SCNN1B	P51168	640 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	RENBP	P51606	427 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	SLC10A7	Q0GE19	358 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	SRSF6	Q13247	344 aa	Known RBP	13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	LBR	Q14739	615 aa	Known RBP	13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	NR1D2	Q14995	579 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	TGIF1	Q15583	401 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	CNGA3	Q16281	694 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	TSR1	Q2NL82	804 aa	Known RBP	13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	E4F1	Q66K89	784 aa	Predicted RBP	13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	PNCK	Q6P2M8	343 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	ZNF438	Q7Z4V0	828 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	LZTR1	Q8N653	840 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042		Q8N9G6	341 aa	Predicted RBP	13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	GPBAR1	Q8TDU6	330 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	NUS1	Q96E22	293 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	CYP4F12	Q9HCS2	524 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	CWC15	Q9P013	229 aa	Known RBP	13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	LRIT1	Q9P2V4	623 aa		13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	ZFC3H1	O60293	1989 aa	Known RBP	13.41	□□□□□ -0.26
COPS7B-219	ENST00000474042	SDK2	Q58EX2	2172 aa		13.4	□□□□□ -0.26
COPS7B-219	ENST00000474042		A0A1W2PQ67	120 aa		13.4	□□□□□ -0.26
COPS7B-219	ENST00000474042	LRRC53	A6NM62	1247 aa		13.4	□□□□□ -0.26
COPS7B-219	ENST00000474042	PDE2A	O00408	941 aa	Predicted RBP	13.4	□□□□□ -0.26
COPS7B-219	ENST00000474042	TEX33	O43247	280 aa		13.4	□□□□□ -0.26
COPS7B-219	ENST00000474042	HEXIM1	O94992	359 aa	Known RBP	13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms