RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 KCNK1O00180 336 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 FCHO1O14526 889 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 TPP1O14773 563 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 NRP1O14786 923 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 SHOXO15266 292 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 RFPL1O75677 317 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 HSPA4LO95757 839 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 PGK1P00558 417 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 POMCP01189 267 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 CHRNA1P02708 482 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 KRT16P08779 473 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 COL6A1P12109 1028 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 MYL4P12829 197 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 CPA3P15088 417 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 BDNFP23560 247 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 CST5P28325 142 aaPredicted RBP5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 SERPINB3P29508 390 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 CD52P31358 61 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 NDUFV1P49821 464 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 KPNA1P52294 538 aaPredicted RBP5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 NKX3-2P78367 333 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 NIPAL4Q0D2K0 466 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 BST1Q10588 318 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 ELAVL2Q12926 359 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 SEMA3BQ13214 749 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 CRHR2Q13324 411 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 MPP3Q13368 585 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 COL9A2Q14055 689 aaPredicted RBP5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 PPP2R5DQ14738 602 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 ARHGEF6Q15052 776 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 TEX44Q53QW1 395 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 FASTKD1Q53R41 847 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 ANKRD39Q53RE8 183 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 PCID2Q5JVF3 399 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 WLSQ5T9L3 541 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 N4BP2L1Q5TBK1 243 aaPredicted RBP5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 SYPL2Q5VXT5 272 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 FAM91A1Q658Y4 838 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 PM20D1Q6GTS8 502 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 FAM171BQ6P995 826 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 TRMT10BQ6PF06 316 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 CRTC3Q6UUV7 619 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 PAQR9Q6ZVX9 377 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 RAPH1Q70E73 1250 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 ZNF534Q76KX8 674 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 STRA8Q7Z7C7 330 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 TAC4Q86UU9 113 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 KCNMB4Q86W47 210 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 HOMEZQ8IX15 550 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 BBS5Q8N3I7 341 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 MPP5Q8N3R9 675 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 ATP6V0D2Q8N8Y2 350 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 PPFIBP2Q8ND30 876 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 OR52K1Q8NGK4 314 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 RFWD2Q8NHY2 731 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 RDH11Q8TC12 318 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 CALML6Q8TD86 181 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 DQX1Q8TE96 717 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 RSPH1Q8WYR4 309 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 NDRG1Q92597 394 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 LPPQ93052 612 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 FUBP3Q96I24 572 aaKnown RBP eCLIP5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 AGAP3Q96P47 875 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 TSGA13Q96PP4 275 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 RBBP8Q99708 897 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 TBL1YQ9BQ87 522 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 FTHL17Q9BXU8 183 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 SEZ6LQ9BYH1 1024 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 MAGEB5Q9BZ81 275 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 CXCL16Q9H2A7 254 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 SMOC2Q9H3U7 446 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 CD248Q9HCU0 757 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 WDR6Q9NNW5 1121 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 CASS4Q9NQ75 786 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 ENTPD7Q9NQZ7 604 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 C20orf96Q9NUD7 363 aaPredicted RBP5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 TAGLN3Q9UI15 199 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 GJD2Q9UKL4 321 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 ABT1Q9ULW3 272 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 PADI3Q9ULW8 664 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 PPT2Q9UMR5 302 aa5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 HBS1LQ9Y450 684 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 TIMM13Q9Y5L4 95 aaPredicted RBP5.95□□□□□ -1.46
ATPAF1-204ENST00000474020 TEX51A0A1B0GUA7 166 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 OR6C75A6NL08 312 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 SLCO1B7G3V0H7 640 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 SYN3O14994 580 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 MATN3O15232 486 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 IRAK2O43187 625 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 PLIN3O60664 434 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 PIAS1O75925 651 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 BEST1O76090 585 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 RTN3O95197 1032 aaPredicted RBP5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 CBX6O95503 412 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 JCHAINP01591 159 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 GSNP06396 782 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 ASGR1P07306 291 aa5.94□□□□□ -1.46
ATPAF1-204ENST00000474020 SERPINA6P08185 405 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms