RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 ZNF567Q8N184 647 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 SPATA22Q8NHS9 363 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 CCHCR1Q8TD31 782 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 SETD7Q8WTS6 366 aaKnown RBP13.79□□□□□ -0.2
USF1-205ENST00000473969 CENPTQ96BT3 561 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 BMFQ96LC9 184 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 PPP1R2P1Q96PQ5 205 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 FCRL5Q96RD9 977 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 SRPK1Q96SB4 655 aaKnown RBP13.79□□□□□ -0.2
USF1-205ENST00000473969 C10orf88Q9H8K7 445 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 ERVMER34-1Q9H9K5 563 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 IL21RQ9HBE5 538 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 UBP1Q9NZI7 540 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 JRKLQ9Y4A0 524 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 DCDC2BA2VCK2 349 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 GOLGA6CA6NDK9 693 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 GOLGA6BA6NDN3 693 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 POM121BA6NF01 834 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 NPIPB15A6NHN6 443 aaPredicted RBP13.78□□□□□ -0.2
USF1-205ENST00000473969 GOLGA8CPA6NN73 597 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 ANKRD66B4E2M5 251 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 CEP104O60308 925 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 ANXA9O76027 345 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 MT-CYBP00156 380 aaPredicted RBP13.78□□□□□ -0.2
USF1-205ENST00000473969 PCCBP05166 539 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 ITGAVP06756 1048 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 MMP2P08253 660 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 GOLGA6DP0CG33 693 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 HTR1BP28222 390 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 ACTN2P35609 894 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 GEMP55040 296 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 YPEL5P62699 121 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 RALGDSQ12967 914 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 KLF1Q13351 362 aaPredicted RBP13.78□□□□□ -0.2
USF1-205ENST00000473969 MPP3Q13368 585 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 PDE1CQ14123 709 aaPredicted RBP13.78□□□□□ -0.2
USF1-205ENST00000473969 GALNT3Q14435 633 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 AGERQ15109 404 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 IRF4Q15306 451 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 CNGA3Q16281 694 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 WSCD2Q2TBF2 565 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 HS1BP3Q53T59 392 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 ANKRD20A2Q5SQ80 823 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 ANKRD20A1Q5TYW2 823 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 ANKRD20A3Q5VUR7 823 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 DGLUCYQ7Z3D6 616 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 TP53I13Q8NBR0 393 aaPredicted RBP13.78□□□□□ -0.2
USF1-205ENST00000473969 ATL2Q8NHH9 583 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 NUS1Q96E22 293 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 MCCC1Q96RQ3 725 aaPredicted RBP13.78□□□□□ -0.2
USF1-205ENST00000473969 KLF6Q99612 283 aaPredicted RBP13.78□□□□□ -0.2
USF1-205ENST00000473969 FSD1LQ9BXM9 530 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 GOLGA6AQ9NYA3 693 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 FNDC3AQ9Y2H6 1198 aaKnown RBP13.78□□□□□ -0.2
USF1-205ENST00000473969 AAR2Q9Y312 384 aaKnown RBP13.78□□□□□ -0.2
USF1-205ENST00000473969 PCDHGB2Q9Y5G2 931 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 ZNF292O60281 2723 aa13.78□□□□□ -0.2
USF1-205ENST00000473969 A0A1B0GTQ1 180 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 CAPN8A6NHC0 703 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 F5H423 210 aaPredicted RBP13.77□□□□□ -0.21
USF1-205ENST00000473969 NDST3O95803 873 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 PRLP01236 227 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 STIP1P31948 543 aaKnown RBP13.77□□□□□ -0.21
USF1-205ENST00000473969 CD68P34810 354 aaPredicted RBP13.77□□□□□ -0.21
USF1-205ENST00000473969 IGFALSP35858 605 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 PI4KAP42356 2102 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 IL9RQ01113 521 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 MTM1Q13496 603 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 QPCTQ16769 361 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 LONRF2Q1L5Z9 754 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 PRAMEF14Q5SWL7 426 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 FAM182AQ5T1J6 154 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 LRRC66Q68CR7 880 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 CRTC1Q6UUV9 634 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 ARHGEF18Q6ZSZ5 1173 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 SPATS2Q86XZ4 545 aaKnown RBP13.77□□□□□ -0.21
USF1-205ENST00000473969 REXO1L1PQ8IX06 675 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 IPMKQ8NFU5 416 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 SPATA13Q96N96 652 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 TLR10Q9BXR5 811 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 GBA3Q9H227 469 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 MBNL1Q9NR56 388 aaKnown RBP13.77□□□□□ -0.21
USF1-205ENST00000473969 DNAJC28Q9NX36 388 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 ZNF148Q9UQR1 794 aa13.77□□□□□ -0.21
USF1-205ENST00000473969 TRPM6Q9BX84 2022 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 C1orf232A0A0U1RR37 186 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 TCRBV7S2A1N4TA0A589 114 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 C5orf60A6NFR6 353 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 H3BM21 787 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 CACNB4O00305 520 aaPredicted RBP13.76□□□□□ -0.21
USF1-205ENST00000473969 PDE2AO00408 941 aaPredicted RBP13.76□□□□□ -0.21
USF1-205ENST00000473969 ENC1O14682 589 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 FLRT2O43155 660 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 PCDHGA12O60330 932 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 FGGP02679 453 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 CSRP1P21291 193 aaKnown RBP13.76□□□□□ -0.21
USF1-205ENST00000473969 LHCGRP22888 699 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 KELP23276 732 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 RXRGP48443 463 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 WNT3AP56704 352 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms