RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 NR1D1P20393 614 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 UGT1A3P35503 534 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 ETFBP38117 255 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 PTPN9P43378 593 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 MTIF2P46199 727 aaKnown RBP9.65□□□□□ -0.86
MCF2L-223ENST00000473345 POLD2P49005 469 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 BLKP51451 505 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 MAN2A1Q16706 1144 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 CA9Q16790 459 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 SKOR2Q2VWA4 1001 aaPredicted RBP9.65□□□□□ -0.86
MCF2L-223ENST00000473345 VWA3BQ502W6 1294 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 INO80DQ53TQ3 878 aaPredicted RBP9.65□□□□□ -0.86
MCF2L-223ENST00000473345 WDR59Q6PJI9 974 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 XKR5Q6UX68 686 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 ZNF761Q86XN6 746 aaPredicted RBP9.65□□□□□ -0.86
MCF2L-223ENST00000473345 ARHGAP12Q8IWW6 846 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 UNC5BQ8IZJ1 945 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 NAGSQ8N159 534 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 ARFGAP1Q8N6T3 406 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 BMPERQ8N8U9 685 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 GPBAR1Q8TDU6 330 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 NTAN1Q96AB6 310 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 ECHDC3Q96DC8 303 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 FAM81BQ96LP2 452 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 CMKLR1Q99788 373 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 SLC39A8Q9C0K1 460 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 DPEP2Q9H4A9 486 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 ZNF71Q9NQZ8 489 aaPredicted RBP9.65□□□□□ -0.86
MCF2L-223ENST00000473345 KIAA1468Q9P260 1216 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 ATP8A1Q9Y2Q0 1164 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 PAXBP1Q9Y5B6 917 aa9.65□□□□□ -0.86
MCF2L-223ENST00000473345 LOC101059948A0A1B0GTJ6 334 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 PRSS38A1L453 326 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 TMEM110-MUSTN1A8MSY1 372 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 WASH4PA8MWX3 477 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 TMX2-CTNND1H3BSU7 103 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 NUDT21O43809 227 aaKnown RBP9.64□□□□□ -0.87
MCF2L-223ENST00000473345 GFPT2O94808 682 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 ECEL1O95672 775 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 LSM8O95777 96 aaKnown RBP9.64□□□□□ -0.87
MCF2L-223ENST00000473345 CEACAM5P06731 702 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 UNGP13051 313 aaPredicted RBP9.64□□□□□ -0.87
MCF2L-223ENST00000473345 LHCGRP22888 699 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 F8A1P23610 371 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 EPHB2P29323 1055 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 OAS2P29728 719 aaKnown RBP9.64□□□□□ -0.87
MCF2L-223ENST00000473345 ALDH4A1P30038 563 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 GEMIN4P57678 1058 aaKnown RBP9.64□□□□□ -0.87
MCF2L-223ENST00000473345 UBE2HP62256 183 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 RPL7AP62424 266 aaKnown RBP9.64□□□□□ -0.87
MCF2L-223ENST00000473345 KCNAB2Q13303 367 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 MAP9Q49MG5 647 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 ACBD5Q5T8D3 534 aaPredicted RBP9.64□□□□□ -0.87
MCF2L-223ENST00000473345 AFMIDQ63HM1 303 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 CYP4V2Q6ZWL3 525 aaPredicted RBP9.64□□□□□ -0.87
MCF2L-223ENST00000473345 STRADAQ7RTN6 431 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 DNAAF5Q86Y56 855 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 UMODL1-AS1Q8N2C9 162 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 CBARPQ8N350 705 aaPredicted RBP9.64□□□□□ -0.87
MCF2L-223ENST00000473345 NPWQ8N729 165 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 FNIP1Q8TF40 1166 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 SCG3Q8WXD2 468 aaKnown RBP9.64□□□□□ -0.87
MCF2L-223ENST00000473345 ART4Q93070 314 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 COQ10AQ96MF6 247 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 PEBP4Q96S96 227 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 C1QTNF7Q9BXJ2 289 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 FRMD8Q9BZ67 464 aaPredicted RBP9.64□□□□□ -0.87
MCF2L-223ENST00000473345 PDCL3Q9H2J4 239 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 APMAPQ9HDC9 416 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 SAMSN1Q9NSI8 373 aaKnown RBP9.64□□□□□ -0.87
MCF2L-223ENST00000473345 TAAR2Q9P1P5 351 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 HOOK1Q9UJC3 728 aaKnown RBP9.64□□□□□ -0.87
MCF2L-223ENST00000473345 FZD10Q9ULW2 581 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 PCDHGA3Q9Y5H0 932 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 UNC13CQ8NB66 2214 aa9.64□□□□□ -0.87
MCF2L-223ENST00000473345 IGHV1OR21-1A0A087WYE8 117 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 TEX33O43247 280 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 CREB3O43889 395 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 PRAMEF11O60813 436 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 CPNE6O95741 557 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 SOD1P00441 154 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 THRAP10827 490 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 GP1BBP13224 206 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 CCNB1P14635 433 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 HTR1BP28222 390 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 SDC4P31431 198 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 LIMK2P53671 638 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 JAM2P57087 298 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 SNX16P57768 344 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 BPIFB4P59827 614 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 CDR2Q01850 454 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 ELP6Q0PNE2 266 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 IHHQ14623 411 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 CNGA3Q16281 694 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 DPCR1Q3MIW9 517 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 ANKS6Q68DC2 871 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 PNCKQ6P2M8 343 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 BORAQ6PGQ7 559 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 DPPA4Q7L190 304 aa9.63□□□□□ -0.87
MCF2L-223ENST00000473345 HSD11B1LQ7Z5J1 315 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms