RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 CDO1Q16878 200 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 MIIPQ5JXC2 388 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 ACBD5Q5T8D3 534 aaPredicted RBP9.38□□□□□ -0.91
VCL-204ENST00000472585 ARCQ7LC44 396 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 GKN2Q86XP6 184 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 NRROSQ86YC3 692 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 CAMK1DQ8IU85 385 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 FAM46DQ8NEK8 389 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 SLC20A1Q8WUM9 679 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 CENPIQ92674 756 aaPredicted RBP9.38□□□□□ -0.91
VCL-204ENST00000472585 EXOC2Q96KP1 924 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 FAM81BQ96LP2 452 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 OSBPL1AQ9BXW6 950 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 B3GNT4Q9C0J1 378 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 TMEM168Q9H0V1 697 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 PCDH12Q9NPG4 1184 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 METTL5Q9NRN9 209 aaKnown RBP9.38□□□□□ -0.91
VCL-204ENST00000472585 LRIT1Q9P2V4 623 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 KLQ9UEF7 1012 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 RWDD2AQ9UIY3 292 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 VPS4AQ9UN37 437 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 DAAM1Q9Y4D1 1078 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 DGKBQ9Y6T7 804 aa9.38□□□□□ -0.91
VCL-204ENST00000472585 PRRC2CQ9Y520 2896 aaKnown RBP9.38□□□□□ -0.91
VCL-204ENST00000472585 POLQO75417 2590 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 ESPL1Q14674 2120 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 C2CD4BA6NLJ0 364 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 TMEM110-MUSTN1A8MSY1 372 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.37□□□□□ -0.91
VCL-204ENST00000472585 TOR1BO14657 336 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 RAMP2O60895 175 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 PCCBP05166 539 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 FGF3P11487 239 aaPredicted RBP9.37□□□□□ -0.91
VCL-204ENST00000472585 GLB1P16278 677 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 CD97P48960 835 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 RIPPLY3P57055 190 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 SNX16P57768 344 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 RALGDSQ12967 914 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 PTP4A2Q12974 167 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 SEPT6Q14141 434 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 ARHGEF7Q14155 803 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 LACTB2Q53H82 288 aaPredicted RBP9.37□□□□□ -0.91
VCL-204ENST00000472585 KLHDC7AQ5VTJ3 777 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 NAA35Q5VZE5 725 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 TAF8Q7Z7C8 310 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 C17orf82Q86X59 251 aaPredicted RBP9.37□□□□□ -0.91
VCL-204ENST00000472585 TEX19Q8NA77 164 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 RCBTB1Q8NDN9 531 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 SLC30A5Q8TAD4 765 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 SSC4DQ8WTU2 575 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 NKD1Q969G9 470 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 ARHGEF26Q96DR7 871 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 HMCESQ96FZ2 354 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 WDR92Q96MX6 357 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 GDAP1L1Q96MZ0 367 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 PCDHB18PQ96TA0 734 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 NUDT22Q9BRQ3 303 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 SUV39H2Q9H5I1 410 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 PLA2G2EQ9NZK7 142 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 HOOK1Q9UJC3 728 aaKnown RBP9.37□□□□□ -0.91
VCL-204ENST00000472585 NOCTQ9UK39 431 aaKnown RBP9.37□□□□□ -0.91
VCL-204ENST00000472585 MED13Q9UHV7 2174 aa9.37□□□□□ -0.91
VCL-204ENST00000472585 FBN2P35556 2912 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 IGHV5-10-1A0A0J9YXX1 117 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 RASA4BC9J798 803 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 J3KR12 359 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 CAPN5O15484 640 aaPredicted RBP9.36□□□□□ -0.91
VCL-204ENST00000472585 RASA4O43374 803 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 RECQL5O94762 991 aaPredicted RBP9.36□□□□□ -0.91
VCL-204ENST00000472585 TNFP01375 233 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 CYP1A1P04798 512 aaPredicted RBP9.36□□□□□ -0.91
VCL-204ENST00000472585 FGF1P05230 155 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 KRT7P08729 469 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 LIFP15018 202 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 PNLIPP16233 465 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 MMP8P22894 467 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 CD1CP29017 333 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 RFC1P35251 1148 aaPredicted RBP9.36□□□□□ -0.91
VCL-204ENST00000472585 TRIM23P36406 574 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 MMP12P39900 470 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 MAZP56270 477 aaKnown RBP9.36□□□□□ -0.91
VCL-204ENST00000472585 RHOAP61586 193 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 AMZ1Q400G9 498 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 MAP9Q49MG5 647 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 C14orf28Q4W4Y0 310 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 INO80DQ53TQ3 878 aaPredicted RBP9.36□□□□□ -0.91
VCL-204ENST00000472585 EFHC2Q5JST6 749 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 HEATR4Q86WZ0 1026 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 CACNA2D3Q8IZS8 1091 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 HCAR2Q8TDS4 363 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 EPS8L1Q8TE68 723 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 APOBEC4Q8WW27 367 aaKnown RBP9.36□□□□□ -0.91
VCL-204ENST00000472585 PATE1Q8WXA2 126 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 ABHD17AQ96GS6 310 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 TAAR9Q96RI9 348 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 C1QTNF7Q9BXJ2 289 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 SPRY4Q9C004 299 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 CDH19Q9H159 772 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 PDFQ9HBH1 243 aa9.36□□□□□ -0.91
VCL-204ENST00000472585 TMEM9Q9P0T7 183 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms