RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 LHX3Q9UBR4 397 aa9.24□□□□□ -0.93
SMC4-213ENST00000472282 MKL2Q9ULH7 1088 aa9.24□□□□□ -0.93
SMC4-213ENST00000472282 COL27A1Q8IZC6 1860 aaPredicted RBP9.23□□□□□ -0.93
SMC4-213ENST00000472282 LRP4O75096 1905 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 GOLGA6L9A6NEM1 432 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 KIF5CO60282 957 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 PCDHGA12O60330 932 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 MAFKO60675 156 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 CHRNA3P32297 505 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 CETN2P41208 172 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 RECQLP46063 649 aaPredicted RBP9.23□□□□□ -0.93
SMC4-213ENST00000472282 CCNHP51946 323 aaPredicted RBP9.23□□□□□ -0.93
SMC4-213ENST00000472282 CLDN6P56747 220 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 C21orf59P57076 290 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 RHOAP61586 193 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 SLC10A7Q0GE19 358 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 BNIP3Q12983 259 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 CYTH1Q15438 398 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 INO80DQ53TQ3 878 aaPredicted RBP9.23□□□□□ -0.93
SMC4-213ENST00000472282 CARD16Q5EG05 197 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 ATXN7L2Q5T6C5 722 aaPredicted RBP9.23□□□□□ -0.93
SMC4-213ENST00000472282 PIP5KL1Q5T9C9 394 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 TMCO4Q5TGY1 634 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 CCDC181Q5TID7 509 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 CCNI2Q6ZMN8 369 aaPredicted RBP9.23□□□□□ -0.93
SMC4-213ENST00000472282 DPY19L3Q6ZPD9 716 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 BBS12Q6ZW61 710 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 RYBPQ8N488 228 aaPredicted RBP9.23□□□□□ -0.93
SMC4-213ENST00000472282 OR6K2Q8NGY2 324 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 CASKIN2Q8WXE0 1202 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 VOPP1Q96AW1 172 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 ISG20Q96AZ6 181 aaKnown RBP9.23□□□□□ -0.93
SMC4-213ENST00000472282 HDAC11Q96DB2 347 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 EXOC2Q96KP1 924 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 CCDC114Q96M63 670 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 ZNF599Q96NL3 588 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 OLFM3Q96PB7 478 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 ELF4Q99607 663 aaPredicted RBP9.23□□□□□ -0.93
SMC4-213ENST00000472282 MYOCQ99972 504 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 SPOCK3Q9BQ16 436 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 TLR10Q9BXR5 811 aa9.23□□□□□ -0.93
SMC4-213ENST00000472282 SAE1Q9UBE0 346 aaPredicted RBP9.23□□□□□ -0.93
SMC4-213ENST00000472282 APOBEC2Q9Y235 224 aaKnown RBP9.23□□□□□ -0.93
SMC4-213ENST00000472282 GOLGA4Q13439 2230 aaKnown RBP9.22□□□□□ -0.93
SMC4-213ENST00000472282 FAM149AA5PLN7 773 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 C1QTNF3-AMACRE9PGA6 284 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 APOC4-APOC2K7ER74 178 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 KPNA3O00505 521 aaPredicted RBP9.22□□□□□ -0.93
SMC4-213ENST00000472282 ENC1O14682 589 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 PPP1R12AO14974 1030 aaPredicted RBP9.22□□□□□ -0.93
SMC4-213ENST00000472282 ALOX15BO15296 676 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 SLC7A4O43246 635 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 RNGTTO60942 597 aaKnown RBP9.22□□□□□ -0.93
SMC4-213ENST00000472282 IGSF6O95976 241 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 PEX11BO96011 259 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 GSRP00390 522 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 APOC2P02655 101 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 PRLRP16471 622 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 GKP32189 559 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 GRK6P43250 576 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 NXPH1P58417 271 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 SNRPD1P62314 119 aaKnown RBP9.22□□□□□ -0.93
SMC4-213ENST00000472282 PPIDQ08752 370 aaKnown RBP9.22□□□□□ -0.93
SMC4-213ENST00000472282 SFSWAPQ12872 951 aaKnown RBP9.22□□□□□ -0.93
SMC4-213ENST00000472282 DNAJC3Q13217 504 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 ZNF235Q14590 738 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 PDK1Q15118 436 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 CCDC157Q569K6 752 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 FAM46CQ5VWP2 391 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 NAPEPLDQ6IQ20 393 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 TIGD7Q6NT04 549 aaPredicted RBP9.22□□□□□ -0.93
SMC4-213ENST00000472282 B4GALNT4Q76KP1 1039 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 TMPRSS7Q7RTY8 843 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 KANSL1Q7Z3B3 1105 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 DSG4Q86SJ6 1040 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 TRIM69Q86WT6 500 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 LRRC49Q8IUZ0 686 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 CCDC13Q8IYE1 715 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 C17orf53Q8N3J3 647 aaPredicted RBP9.22□□□□□ -0.93
SMC4-213ENST00000472282 GOLGA6L1Q8N7Z2 621 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 TSEN2Q8NCE0 465 aaKnown RBP9.22□□□□□ -0.93
SMC4-213ENST00000472282 CCNYQ8ND76 341 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 OR2AP1Q8NGE2 309 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 GRIN3AQ8TCU5 1115 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 SAP25Q8TEE9 199 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 NSMCE1Q8WV22 266 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 UBE2Q2Q8WVN8 375 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 P3H4Q92791 437 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 GDAP1L1Q96MZ0 367 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 LGMNQ99538 433 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 CINPQ9BW66 212 aaPredicted RBP9.22□□□□□ -0.93
SMC4-213ENST00000472282 ZDHHC6Q9H6R6 413 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 FZD3Q9NPG1 666 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 HECAQ9UBI9 543 aaPredicted RBP9.22□□□□□ -0.93
SMC4-213ENST00000472282 ATXN7L1Q9ULK2 861 aaPredicted RBP9.22□□□□□ -0.93
SMC4-213ENST00000472282 ZFR2Q9UPR6 939 aaKnown RBP9.22□□□□□ -0.93
SMC4-213ENST00000472282 EFR3BQ9Y2G0 817 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 SCN8AQ9UQD0 1980 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 IGF2RP11717 2491 aa9.22□□□□□ -0.93
SMC4-213ENST00000472282 A0A1W2PQU0 124 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms