RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 DSELQ8IZU8 1212 aa3.77□□□□□ -1.81
RBM39-228ENST00000471635 ENAHQ8N8S7 591 aaPredicted RBP3.77□□□□□ -1.81
RBM39-228ENST00000471635 SCCPDHQ8NBX0 429 aa3.77□□□□□ -1.81
RBM39-228ENST00000471635 DMBX1Q8NFW5 382 aa3.77□□□□□ -1.81
RBM39-228ENST00000471635 BBS10Q8TAM1 723 aa3.77□□□□□ -1.81
RBM39-228ENST00000471635 RUFY2Q8WXA3 655 aa3.77□□□□□ -1.81
RBM39-228ENST00000471635 DUX3Q96PT4 197 aa3.77□□□□□ -1.81
RBM39-228ENST00000471635 HAUS8Q9BT25 410 aa3.77□□□□□ -1.81
RBM39-228ENST00000471635 TRMT61BQ9BVS5 477 aaKnown RBP3.77□□□□□ -1.81
RBM39-228ENST00000471635 TAOK3Q9H2K8 898 aa3.77□□□□□ -1.81
RBM39-228ENST00000471635 FBRSL1Q9HCM7 1045 aaKnown RBP3.77□□□□□ -1.81
RBM39-228ENST00000471635 DDX4Q9NQI0 724 aaKnown RBP3.77□□□□□ -1.81
RBM39-228ENST00000471635 IL1RAPL1Q9NZN1 696 aa3.77□□□□□ -1.81
RBM39-228ENST00000471635 TINAGQ9UJW2 476 aa3.77□□□□□ -1.81
RBM39-228ENST00000471635 POU2F3Q9UKI9 436 aa3.77□□□□□ -1.81
RBM39-228ENST00000471635 PDS5AQ29RF7 1337 aaKnown RBP3.76□□□□□ -1.81
RBM39-228ENST00000471635 CCDC194A0A1B0GVG4 234 aa3.76□□□□□ -1.81
RBM39-228ENST00000471635 BCAT2O15382 392 aaPredicted RBP3.76□□□□□ -1.81
RBM39-228ENST00000471635 IRAK2O43187 625 aa3.76□□□□□ -1.81
RBM39-228ENST00000471635 APOHP02749 345 aaPredicted RBP3.76□□□□□ -1.81
RBM39-228ENST00000471635 G6PDP11413 515 aa3.76□□□□□ -1.81
RBM39-228ENST00000471635 HLA-DOBP13765 273 aa3.76□□□□□ -1.81
RBM39-228ENST00000471635 GRK6P43250 576 aa3.76□□□□□ -1.81
RBM39-228ENST00000471635 FMO5P49326 533 aa3.76□□□□□ -1.81
RBM39-228ENST00000471635 ATP12AP54707 1039 aa3.76□□□□□ -1.81
RBM39-228ENST00000471635 GRIK3Q13003 919 aa3.76□□□□□ -1.81
RBM39-228ENST00000471635 SLC12A1Q13621 1099 aa3.76□□□□□ -1.81
RBM39-228ENST00000471635 KRT72Q14CN4 511 aa3.76□□□□□ -1.81
RBM39-228ENST00000471635 VEPH1Q14D04 833 aa3.76□□□□□ -1.81
RBM39-228ENST00000471635 CTF1Q16619 201 aa3.76□□□□□ -1.81
RBM39-228ENST00000471635 FOXRED2Q8IWF2 684 aa3.76□□□□□ -1.81
RBM39-228ENST00000471635 USP38Q8NB14 1042 aa3.76□□□□□ -1.81
RBM39-228ENST00000471635 AGBL3Q8NEM8 1001 aa3.76□□□□□ -1.81
RBM39-228ENST00000471635 KIAA1456Q9P272 454 aa3.76□□□□□ -1.81
RBM39-228ENST00000471635 RALYQ9UKM9 306 aaKnown RBP3.76□□□□□ -1.81
RBM39-228ENST00000471635 TCF19Q9Y242 345 aa3.76□□□□□ -1.81
RBM39-228ENST00000471635 TP53BP1Q12888 1972 aaPredicted RBP3.76□□□□□ -1.81
RBM39-228ENST00000471635 A0A1W2PS18 150 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 ASPDHA6ND91 283 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 FAM72CH0Y354 149 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 CAPN9O14815 690 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 LDLRP01130 860 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 AMBPP02760 352 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 FGF5P12034 268 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 POU1F1P28069 291 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 TMPOP42166 694 aaKnown RBP3.75□□□□□ -1.81
RBM39-228ENST00000471635 LINC01547P58512 204 aaPredicted RBP3.75□□□□□ -1.81
RBM39-228ENST00000471635 TDGQ13569 410 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 TAF11Q15544 211 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 EIF2S3LQ2VIR3 472 aaKnown RBP3.75□□□□□ -1.81
RBM39-228ENST00000471635 FAM72AQ5TYM5 149 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 FAM72DQ6L9T8 149 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 RGMBQ6NW40 437 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 ANKRD54Q6NXT1 300 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 SLC36A4Q6YBV0 504 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 MTSS1LQ765P7 747 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 TADA2BQ86TJ2 420 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 FAM72BQ86X60 149 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 LSM14AQ8ND56 463 aaKnown RBP3.75□□□□□ -1.81
RBM39-228ENST00000471635 SLC20A1Q8WUM9 679 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 CCT6BQ92526 530 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 TBC1D20Q96BZ9 403 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 FBXL8Q96CD0 374 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 BBS4Q96RK4 519 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 REEP2Q9BRK0 252 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 ITM2CQ9NQX7 267 aa3.75□□□□□ -1.81
RBM39-228ENST00000471635 TSPAN3O60637 253 aa3.74□□□□□ -1.81
RBM39-228ENST00000471635 MMP2P08253 660 aa3.74□□□□□ -1.81
RBM39-228ENST00000471635 CYC1P08574 325 aa3.74□□□□□ -1.81
RBM39-228ENST00000471635 ITGA2P17301 1181 aa3.74□□□□□ -1.81
RBM39-228ENST00000471635 TIMP3P35625 211 aa3.74□□□□□ -1.81
RBM39-228ENST00000471635 CDKN1AP38936 164 aa3.74□□□□□ -1.81
RBM39-228ENST00000471635 SEC61BP60468 96 aaKnown RBP3.74□□□□□ -1.81
RBM39-228ENST00000471635 KCNT1Q5JUK3 1230 aa3.74□□□□□ -1.81
RBM39-228ENST00000471635 C10orf62Q5T681 223 aaPredicted RBP3.74□□□□□ -1.81
RBM39-228ENST00000471635 HIST2H2BCQ6DN03 193 aa3.74□□□□□ -1.81
RBM39-228ENST00000471635 GFRALQ6UXV0 394 aa3.74□□□□□ -1.81
RBM39-228ENST00000471635 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.74□□□□□ -1.81
RBM39-228ENST00000471635 TMEM219Q86XT9 240 aa3.74□□□□□ -1.81
RBM39-228ENST00000471635 CHERPQ8IWX8 916 aaKnown RBP3.74□□□□□ -1.81
RBM39-228ENST00000471635 METTL27Q8N6F8 245 aaPredicted RBP3.74□□□□□ -1.81
RBM39-228ENST00000471635 PLD5Q8N7P1 536 aa3.74□□□□□ -1.81
RBM39-228ENST00000471635 DUSP19Q8WTR2 217 aa3.74□□□□□ -1.81
RBM39-228ENST00000471635 PHF7Q9BWX1 381 aaPredicted RBP3.74□□□□□ -1.81
RBM39-228ENST00000471635 ESRP2Q9H6T0 727 aaKnown RBP3.74□□□□□ -1.81
RBM39-228ENST00000471635 PLEKHA5Q9HAU0 1116 aa3.74□□□□□ -1.81
RBM39-228ENST00000471635 KLHL1Q9NR64 748 aa3.74□□□□□ -1.81
RBM39-228ENST00000471635 MCM9Q9NXL9 1143 aa3.74□□□□□ -1.81
RBM39-228ENST00000471635 ANTXRLA6NF34 631 aa3.73□□□□□ -1.81
RBM39-228ENST00000471635 AKR1B15C9JRZ8 316 aaPredicted RBP3.73□□□□□ -1.81
RBM39-228ENST00000471635 EDIL3O43854 480 aa3.73□□□□□ -1.81
RBM39-228ENST00000471635 AGAP20933 346 aa3.73□□□□□ -1.81
RBM39-228ENST00000471635 ERVK11-1P61568 191 aa3.73□□□□□ -1.81
RBM39-228ENST00000471635 CCDC6Q16204 474 aa3.73□□□□□ -1.81
RBM39-228ENST00000471635 SGO1Q5FBB7 561 aa3.73□□□□□ -1.81
RBM39-228ENST00000471635 FBXO46Q6PJ61 603 aaPredicted RBP3.73□□□□□ -1.81
RBM39-228ENST00000471635 TAOK1Q7L7X3 1001 aa3.73□□□□□ -1.81
RBM39-228ENST00000471635 WDR63Q8IWG1 891 aa3.73□□□□□ -1.81
RBM39-228ENST00000471635 SLC35F3Q8IY50 421 aa3.73□□□□□ -1.81
RBM39-228ENST00000471635 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms