RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 TIPARPQ7Z3E1 657 aaKnown RBP6.9□□□□□ -1.3
HDAC1-204ENST00000471488 RASGRP3Q8IV61 690 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 ZNF683Q8IZ20 524 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 EHBP1Q8NDI1 1231 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 OR10G6Q8NH81 332 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 ARHGEF2Q92974 986 aaKnown RBP6.9□□□□□ -1.3
HDAC1-204ENST00000471488 ISG20Q96AZ6 181 aaKnown RBP6.9□□□□□ -1.3
HDAC1-204ENST00000471488 RTP4Q96DX8 246 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 CCDC34Q96HJ3 373 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 INTS4Q96HW7 963 aaKnown RBP6.9□□□□□ -1.3
HDAC1-204ENST00000471488 CFAP57Q96MR6 1250 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 TEFMQ96QE5 360 aaKnown RBP6.9□□□□□ -1.3
HDAC1-204ENST00000471488 LGR4Q9BXB1 951 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 ULBP3Q9BZM4 244 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 TTYH3Q9C0H2 523 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 B3GNT4Q9C0J1 378 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 WDR26Q9H7D7 661 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 SLAMF7Q9NQ25 335 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 NDFIP2Q9NV92 336 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 ASNSD1Q9NWL6 643 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 RMND1Q9NWS8 449 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 RCOR3Q9P2K3 495 aaPredicted RBP6.9□□□□□ -1.3
HDAC1-204ENST00000471488 CROTQ9UKG9 612 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 ITGB1BP2Q9UKP3 347 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 POLHQ9Y253 713 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 RPS6KL1Q9Y6S9 549 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 DGKBQ9Y6T7 804 aa6.9□□□□□ -1.3
HDAC1-204ENST00000471488 SPENQ96T58 3664 aaKnown RBP6.9□□□□□ -1.31
HDAC1-204ENST00000471488 ANKRD17O75179 2603 aaKnown RBP6.89□□□□□ -1.31
HDAC1-204ENST00000471488 IGHV1OR21-1A0A087WYE8 117 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 B4E171 279 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 K7ELQ4 463 aaPredicted RBP6.89□□□□□ -1.31
HDAC1-204ENST00000471488 PPM1DO15297 605 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 RECQL5O94762 991 aaPredicted RBP6.89□□□□□ -1.31
HDAC1-204ENST00000471488 F9P00740 461 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 PDGFAP04085 211 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 FURINP09958 794 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 THRAP10827 490 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 TSPAN7P41732 249 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 ACTR1BP42025 376 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 STAT5AP42229 794 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 POLD2P49005 469 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 SEPHS1P49903 392 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 CCL11P51671 97 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 PGDP52209 483 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 KIAA1024LP59773 190 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 ACTR1AP61163 376 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 ABHD18Q0P651 414 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 NFATC2Q13469 925 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 STIM1Q13586 685 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 UGP2Q16851 508 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 TSR1Q2NL82 804 aaKnown RBP6.89□□□□□ -1.31
HDAC1-204ENST00000471488 PTPN20Q4JDL3 420 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 OTUD1Q5VV17 481 aaPredicted RBP6.89□□□□□ -1.31
HDAC1-204ENST00000471488 ZC3H18Q86VM9 953 aaKnown RBP6.89□□□□□ -1.31
HDAC1-204ENST00000471488 CAMK1DQ8IU85 385 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 WDTC1Q8N5D0 677 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 ESX1Q8N693 406 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 GALNT6Q8NCL4 622 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 STAMBPL1Q96FJ0 436 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 NPY6RQ99463 290 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 CRACR2AQ9BSW2 395 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 SLC29A3Q9BZD2 475 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 TRIT1Q9H3H1 467 aaKnown RBP6.89□□□□□ -1.31
HDAC1-204ENST00000471488 CUEDC1Q9NWM3 386 aaPredicted RBP6.89□□□□□ -1.31
HDAC1-204ENST00000471488 OR12D3Q9UGF7 316 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 LNPEPQ9UIQ6 1025 aa6.89□□□□□ -1.31
HDAC1-204ENST00000471488 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.89□□□□□ -1.31
HDAC1-204ENST00000471488 ABCA12Q86UK0 2595 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 IGLV3-10A0A075B6K4 115 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 ARGFXA6NJG6 315 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 TCP11X1B4DZS4 312 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 PDE2AO00408 941 aaPredicted RBP6.88□□□□□ -1.31
HDAC1-204ENST00000471488 PSMA7O14818 248 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 ZNF202O95125 648 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 MAP3K6O95382 1288 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 DDAH2O95865 285 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 F8A1P23610 371 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 STAT1P42224 750 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 STX17P56962 302 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 CTBSQ01459 385 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 APBA1Q02410 837 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 LRRC63Q05C16 580 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 PKP1Q13835 747 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 ELOAQ14241 798 aaKnown RBP6.88□□□□□ -1.31
HDAC1-204ENST00000471488 INPP5JQ15735 1006 aaPredicted RBP6.88□□□□□ -1.31
HDAC1-204ENST00000471488 SLC25A52Q3SY17 297 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 ZNF658Q5TYW1 1059 aaPredicted RBP6.88□□□□□ -1.31
HDAC1-204ENST00000471488 TAF3Q5VWG9 929 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 C1QL3Q5VWW1 255 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 RAET1GQ6H3X3 334 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 TMEM71Q6P5X7 295 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 C6orf15Q6UXA7 325 aaPredicted RBP6.88□□□□□ -1.31
HDAC1-204ENST00000471488 SLC26A9Q7LBE3 791 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 TTC30BQ8N4P2 665 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 EMC1Q8N766 993 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 LMO3Q8TAP4 145 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 FNIP1Q8TF40 1166 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 TBC1D31Q96DN5 1066 aa6.88□□□□□ -1.31
HDAC1-204ENST00000471488 NUS1Q96E22 293 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms