RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 PTK2BQ14289 1009 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 ODF2Q5BJF6 829 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 ZNF805Q5CZA5 627 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 PERM1Q5SV97 790 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 C6orf132Q5T0Z8 1188 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 ZFYVE27Q5T4F4 411 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 MANEALQ5VSG8 457 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 CYP4V2Q6ZWL3 525 aaPredicted RBP9.16□□□□□ -0.94
SF3A1-206ENST00000471037 FAM131BQ86XD5 332 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 VSIG1Q86XK7 387 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 SLC35F3Q8IY50 421 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 RBFAQ8N0V3 343 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 ARL14Q8N4G2 192 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 EXD1Q8NHP7 514 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 WDR36Q8NI36 951 aaKnown RBP9.16□□□□□ -0.94
SF3A1-206ENST00000471037 LMX1AQ8TE12 382 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 ALG3Q92685 438 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 ARHGEF2Q92974 986 aaKnown RBP9.16□□□□□ -0.94
SF3A1-206ENST00000471037 GLMNQ92990 594 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 CENPTQ96BT3 561 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 MED8Q96G25 268 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 RBM41Q96IZ5 413 aaKnown RBP9.16□□□□□ -0.94
SF3A1-206ENST00000471037 PBKQ96KB5 322 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 PEBP4Q96S96 227 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 OSBPL9Q96SU4 736 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 SPON2Q9BUD6 331 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 SNRNP25Q9BV90 132 aaKnown RBP9.16□□□□□ -0.94
SF3A1-206ENST00000471037 LRRC61Q9BV99 259 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 RETREG1Q9H6L5 497 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 ZDHHC6Q9H6R6 413 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 HECAQ9UBI9 543 aaPredicted RBP9.16□□□□□ -0.94
SF3A1-206ENST00000471037 RNF14Q9UBS8 474 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 APOBEC3BQ9UH17 382 aaKnown RBP9.16□□□□□ -0.94
SF3A1-206ENST00000471037 PCSK1NQ9UHG2 260 aa9.16□□□□□ -0.94
SF3A1-206ENST00000471037 FCF1Q9Y324 198 aaKnown RBP9.16□□□□□ -0.94
SF3A1-206ENST00000471037 TDRD6O60522 2096 aaKnown RBP9.16□□□□□ -0.94
SF3A1-206ENST00000471037 CCDC187A0A096LP49 1063 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 ZNF487B1APH4 448 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 NTN3O00634 580 aaPredicted RBP9.15□□□□□ -0.94
SF3A1-206ENST00000471037 TOR1BO14657 336 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 MUSKO15146 869 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 GCATO75600 419 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 URI1O94763 535 aaPredicted RBP9.15□□□□□ -0.94
SF3A1-206ENST00000471037 ZRANB2O95218 330 aaKnown RBP eCLIP9.15□□□□□ -0.94
SF3A1-206ENST00000471037 RARAP10276 462 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 TCF4P15884 667 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 ADRA1BP35368 520 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 GJC1P36383 396 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 MAPKAPK2P49137 400 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 ZNF135P52742 658 aaPredicted RBP9.15□□□□□ -0.94
SF3A1-206ENST00000471037 THOP1P52888 689 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 COPS2P61201 443 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 PDK2Q15119 407 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 DPYSL2Q16555 572 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 SMTNL2Q2TAL5 461 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 RAB6CQ53S08 254 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 PRRT3Q5FWE3 981 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 EFHC2Q5JST6 749 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 ERMARDQ5T6L9 678 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 SEL1L2Q5TEA6 688 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 TXNRD3NBQ6F5E7 133 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 CRTC1Q6UUV9 634 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 MACC1Q6ZN28 852 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 NLRP14Q86W24 1093 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 MAP7D3Q8IWC1 876 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 PHACTR4Q8IZ21 702 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 RCOR2Q8IZ40 523 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 CCDC185Q8N715 623 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 OR2AP1Q8NGE2 309 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 LIN37Q96GY3 246 aaPredicted RBP9.15□□□□□ -0.94
SF3A1-206ENST00000471037 CCDC3Q9BQI4 270 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 OSBPL1AQ9BXW6 950 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 TM6SF2Q9BZW4 377 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 RAB6CQ9H0N0 254 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 TCEAL2Q9H3H9 227 aaPredicted RBP9.15□□□□□ -0.94
SF3A1-206ENST00000471037 ZWILCHQ9H900 591 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.15□□□□□ -0.94
SF3A1-206ENST00000471037 GGT7Q9UJ14 662 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 PNMA8BQ9ULN7 279 aaPredicted RBP9.15□□□□□ -0.94
SF3A1-206ENST00000471037 FZD10Q9ULW2 581 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 AP4E1Q9UPM8 1137 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 ITM2BQ9Y287 266 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 PCDHGA7Q9Y5G6 932 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 ACTL7AQ9Y615 435 aa9.15□□□□□ -0.94
SF3A1-206ENST00000471037 LRRD1A4D1F6 860 aa9.14□□□□□ -0.95
SF3A1-206ENST00000471037 PMS2P1A4D2B8 440 aa9.14□□□□□ -0.95
SF3A1-206ENST00000471037 NEMP1O14524 444 aa9.14□□□□□ -0.95
SF3A1-206ENST00000471037 TNFSF15O95150 251 aa9.14□□□□□ -0.95
SF3A1-206ENST00000471037 UGT2B4P06133 528 aa9.14□□□□□ -0.95
SF3A1-206ENST00000471037 ANXA6P08133 673 aa9.14□□□□□ -0.95
SF3A1-206ENST00000471037 RHOQP17081 205 aa9.14□□□□□ -0.95
SF3A1-206ENST00000471037 GKP32189 559 aa9.14□□□□□ -0.95
SF3A1-206ENST00000471037 CXCR5P32302 372 aa9.14□□□□□ -0.95
SF3A1-206ENST00000471037 HTR7P34969 479 aa9.14□□□□□ -0.95
SF3A1-206ENST00000471037 PTPN7P35236 360 aa9.14□□□□□ -0.95
SF3A1-206ENST00000471037 IGFALSP35858 605 aa9.14□□□□□ -0.95
SF3A1-206ENST00000471037 ACVRL1P37023 503 aa9.14□□□□□ -0.95
SF3A1-206ENST00000471037 ARSEP51690 589 aa9.14□□□□□ -0.95
SF3A1-206ENST00000471037 CDH6P55285 790 aa9.14□□□□□ -0.95
SF3A1-206ENST00000471037 SNRPD1P62314 119 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms