RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 MTA2O94776 668 aa5.52□□□□□ -1.53
SSB-209ENST00000470621 TBX18O95935 607 aa5.52□□□□□ -1.53
SSB-209ENST00000470621 UBL4AP11441 157 aa5.52□□□□□ -1.53
SSB-209ENST00000470621 FGF3P11487 239 aaPredicted RBP5.52□□□□□ -1.53
SSB-209ENST00000470621 SORDQ00796 357 aa5.52□□□□□ -1.53
SSB-209ENST00000470621 IZUMO4Q1ZYL8 232 aa5.52□□□□□ -1.53
SSB-209ENST00000470621 DLK2Q6UY11 383 aa5.52□□□□□ -1.53
SSB-209ENST00000470621 LINGO2Q7L985 606 aa5.52□□□□□ -1.53
SSB-209ENST00000470621 HAPLN4Q86UW8 402 aa5.52□□□□□ -1.53
SSB-209ENST00000470621 RBMXL3Q8N7X1 1067 aaKnown RBP5.52□□□□□ -1.53
SSB-209ENST00000470621 SMRP1Q8NCR6 262 aa5.52□□□□□ -1.53
SSB-209ENST00000470621 LILRB1Q8NHL6 650 aaPredicted RBP5.52□□□□□ -1.53
SSB-209ENST00000470621 CREB3L4Q8TEY5 395 aa5.52□□□□□ -1.53
SSB-209ENST00000470621 RTP4Q96DX8 246 aa5.52□□□□□ -1.53
SSB-209ENST00000470621 PERPQ96FX8 193 aa5.52□□□□□ -1.53
SSB-209ENST00000470621 DOCK7Q96N67 2140 aa5.52□□□□□ -1.53
SSB-209ENST00000470621 POLR3GLQ9BT43 218 aa5.52□□□□□ -1.53
SSB-209ENST00000470621 SCPEP1Q9HB40 452 aa5.52□□□□□ -1.53
SSB-209ENST00000470621 TAS2R10Q9NYW0 307 aa5.52□□□□□ -1.53
SSB-209ENST00000470621 SLCO3A1Q9UIG8 710 aa5.52□□□□□ -1.53
SSB-209ENST00000470621 FBXO9Q9UK97 447 aaPredicted RBP5.52□□□□□ -1.53
SSB-209ENST00000470621 PCDHGB1Q9Y5G3 927 aa5.52□□□□□ -1.53
SSB-209ENST00000470621 IGLV5-37A0A075B6J1 123 aa5.51□□□□□ -1.53
SSB-209ENST00000470621 A0A1W2PPH5 198 aa5.51□□□□□ -1.53
SSB-209ENST00000470621 J3KRW8 73 aa5.51□□□□□ -1.53
SSB-209ENST00000470621 KDM4BO94953 1096 aa5.51□□□□□ -1.53
SSB-209ENST00000470621 HOXB6P17509 224 aaKnown RBP5.51□□□□□ -1.53
SSB-209ENST00000470621 GPTP24298 496 aa5.51□□□□□ -1.53
SSB-209ENST00000470621 CDAP32320 146 aa5.51□□□□□ -1.53
SSB-209ENST00000470621 MPP1Q00013 466 aa5.51□□□□□ -1.53
SSB-209ENST00000470621 NEDD9Q14511 834 aa5.51□□□□□ -1.53
SSB-209ENST00000470621 SF3B4Q15427 424 aaKnown RBP eCLIP5.51□□□□□ -1.538e-7■■■■■ 32.7
SSB-209ENST00000470621 ATF7IPQ6VMQ6 1270 aa5.51□□□□□ -1.53
SSB-209ENST00000470621 GTF3C6Q969F1 213 aa5.51□□□□□ -1.53
SSB-209ENST00000470621 ADGRG7Q96K78 797 aa5.51□□□□□ -1.53
SSB-209ENST00000470621 GPR108Q9NPR9 543 aa5.51□□□□□ -1.53
SSB-209ENST00000470621 CNGB3Q9NQW8 809 aa5.51□□□□□ -1.53
SSB-209ENST00000470621 SNX9Q9Y5X1 595 aa5.51□□□□□ -1.53
SSB-209ENST00000470621 TAF1P21675 1872 aa5.51□□□□□ -1.53
SSB-209ENST00000470621 LRRC53A6NM62 1247 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 USP17L23D6RBM5 183 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 PLRG1O43660 514 aaKnown RBP5.5□□□□□ -1.53
SSB-209ENST00000470621 RTN3O95197 1032 aaPredicted RBP5.5□□□□□ -1.53
SSB-209ENST00000470621 FTCDO95954 541 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 CD4P01730 458 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 CD58P19256 250 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 PAX3P23760 479 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 GABRB2P47870 512 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 CCR9P51686 369 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 EIF3BP55884 814 aaKnown RBP5.5□□□□□ -1.53
SSB-209ENST00000470621 EEF1A2Q05639 463 aaKnown RBP5.5□□□□□ -1.53
SSB-209ENST00000470621 DLG1Q12959 904 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 DCTN2Q13561 401 aaKnown RBP5.5□□□□□ -1.53
SSB-209ENST00000470621 NAE1Q13564 534 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 TBCEQ15813 527 aaPredicted RBP5.5□□□□□ -1.53
SSB-209ENST00000470621 GSTA3Q16772 222 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 AMZ1Q400G9 498 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 KLHL22Q53GT1 634 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 SLC45A4Q5BKX6 768 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 PPP6R3Q5H9R7 873 aaPredicted RBP5.5□□□□□ -1.53
SSB-209ENST00000470621 CAPRIN2Q6IMN6 1127 aaKnown RBP5.5□□□□□ -1.53
SSB-209ENST00000470621 CCDC70Q6NSX1 233 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 CDC73Q6P1J9 531 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 NEK10Q6ZWH5 1172 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 PSPC1Q8WXF1 523 aaKnown RBP5.5□□□□□ -1.53
SSB-209ENST00000470621 FAM84BQ96KN1 310 aaPredicted RBP5.5□□□□□ -1.53
SSB-209ENST00000470621 SLITRK1Q96PX8 696 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 C1QTNF5Q9BXJ0 243 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 KIF9Q9HAQ2 790 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 C1RLQ9NZP8 487 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 MALT1Q9UDY8 824 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 NFS1Q9Y697 457 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 NOTCH4Q99466 2003 aa5.5□□□□□ -1.53
SSB-209ENST00000470621 PLSCR5A0PG75 271 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 CLDN14O95500 239 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 IL7RP16871 459 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 ELF1P32519 619 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 STX2P32856 288 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 KRT9P35527 623 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 PBX3P40426 434 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 ARL1P40616 181 aaPredicted RBP5.49□□□□□ -1.53
SSB-209ENST00000470621 PIP4K2AP48426 406 aaPredicted RBP5.49□□□□□ -1.53
SSB-209ENST00000470621 TMEM115Q12893 351 aaPredicted RBP5.49□□□□□ -1.53
SSB-209ENST00000470621 COASYQ13057 564 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 TBX2Q13207 712 aaPredicted RBP5.49□□□□□ -1.53
SSB-209ENST00000470621 SNTA1Q13424 505 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 CXorf66Q5JRM2 361 aaPredicted RBP5.49□□□□□ -1.53
SSB-209ENST00000470621 KRTAP5-11Q6L8G4 156 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 WDR73Q6P4I2 378 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 CCDC13Q8IYE1 715 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 OR2AK2Q8NG84 335 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 SPATA22Q8NHS9 363 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 RFFLQ8WZ73 363 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 SLC41A2Q96JW4 573 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 PPP1R13BQ96KQ4 1090 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 LMLNQ96KR4 655 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 FAM110AQ9BQ89 295 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 C1QTNF4Q9BXJ3 329 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 PPP1R3EQ9H7J1 279 aa5.49□□□□□ -1.53
SSB-209ENST00000470621 ABI3Q9P2A4 366 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms