RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 DNAJC21Q5F1R6 531 aaKnown RBP11.28□□□□□ -0.6
SREBF1-209ENST00000470247 PCID2Q5JVF3 399 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 CFAP58Q5T655 872 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 ANO7Q6IWH7 933 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 FBXL19Q6PCT2 694 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 KIAA1324Q6UXG2 1013 aaKnown RBP11.28□□□□□ -0.6
SREBF1-209ENST00000470247 LIPIQ6XZB0 460 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 RFLNAQ6ZTI6 216 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 MICALCLQ6ZW33 695 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 USP30Q70CQ3 517 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 CENPUQ71F23 418 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 DPPA4Q7L190 304 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 LYSMD3Q7Z3D4 306 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 TMEM135Q86UB9 458 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 MAML2Q8IZL2 1156 aaPredicted RBP11.28□□□□□ -0.6
SREBF1-209ENST00000470247 CAMKK1Q8N5S9 505 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 TSTD1Q8NFU3 115 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 BLOC1S5Q8TDH9 187 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 RAB7BQ96AH8 199 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 LRRC39Q96DD0 335 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 PPP1R16AQ96I34 528 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 EBNA1BP2Q99848 306 aaKnown RBP11.28□□□□□ -0.6
SREBF1-209ENST00000470247 EPB41L4BQ9H329 900 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 TRABDQ9H4I3 376 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 MRM3Q9HC36 420 aaKnown RBP11.28□□□□□ -0.6
SREBF1-209ENST00000470247 SAYSD1Q9NPB0 183 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 CHRAC1Q9NRG0 131 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 TREX1Q9NSU2 369 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 IL17CQ9P0M4 197 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 MTRF1LQ9UGC7 380 aaKnown RBP11.28□□□□□ -0.6
SREBF1-209ENST00000470247 SLC2A6Q9UGQ3 507 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 SOX13Q9UN79 622 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 ZNF711Q9Y462 761 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 TCAF1Q9Y4C2 921 aa11.28□□□□□ -0.6
SREBF1-209ENST00000470247 FAM237BA0A1B0GVD1 139 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 PLRG1O43660 514 aaKnown RBP11.27□□□□□ -0.61
SREBF1-209ENST00000470247 BUD23O43709 281 aaKnown RBP11.27□□□□□ -0.61
SREBF1-209ENST00000470247 RNASEH2AO75792 299 aaKnown RBP11.27□□□□□ -0.61
SREBF1-209ENST00000470247 APBB3O95704 486 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 DNTTP04053 509 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 C1SP09871 688 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 CYP2A6P11509 494 aaPredicted RBP11.27□□□□□ -0.61
SREBF1-209ENST00000470247 MCM3P25205 808 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 ARNTP27540 789 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 NMBRP28336 390 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 HOXA6P31267 233 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 HMGCLP35914 325 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 TNNT3P45378 269 aaPredicted RBP11.27□□□□□ -0.61
SREBF1-209ENST00000470247 ZNF140P52738 457 aaPredicted RBP11.27□□□□□ -0.61
SREBF1-209ENST00000470247 STC1P52823 247 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 GPX6P59796 221 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 FAM193AP78312 1265 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 CREB5Q02930 508 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 ACVR1Q04771 509 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 TMEM31Q5JXX7 168 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 ARMC3Q5W041 872 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 STEAP4Q687X5 459 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 LRRC66Q68CR7 880 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 ESRP1Q6NXG1 681 aaKnown RBP11.27□□□□□ -0.61
SREBF1-209ENST00000470247 CES3Q6UWW8 571 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 USP45Q70EL2 814 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 CCDC25Q86WR0 208 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 ANKMY2Q8IV38 441 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 ZBED8Q8IZ13 594 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 NDUFAF2Q8N183 169 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 FBXO36Q8NEA4 188 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 PTCD2Q8WV60 388 aaKnown RBP11.27□□□□□ -0.61
SREBF1-209ENST00000470247 PBXIP1Q96AQ6 731 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 MFSD3Q96ES6 412 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 STAMBPL1Q96FJ0 436 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 C9orf72Q96LT7 481 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 SRPK1Q96SB4 655 aaKnown RBP11.27□□□□□ -0.61
SREBF1-209ENST00000470247 SEMA4AQ9H3S1 761 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 ZFYVE1Q9HBF4 777 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 LRRC4CQ9HCJ2 640 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 C11orf16Q9NQ32 467 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 DYRK4Q9NR20 520 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.27□□□□□ -0.61
SREBF1-209ENST00000470247 HACD3Q9P035 362 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 RIMKLBQ9ULI2 386 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 FZD4Q9ULV1 537 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 CHMP2BQ9UQN3 213 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 A0A0C4DFX4 3053 aa11.27□□□□□ -0.61
SREBF1-209ENST00000470247 C1orf232A0A0U1RR37 186 aa11.26□□□□□ -0.61
SREBF1-209ENST00000470247 ZCWPW2A0A1B0GU75 182 aa11.26□□□□□ -0.61
SREBF1-209ENST00000470247 MAGEB16A2A368 324 aa11.26□□□□□ -0.61
SREBF1-209ENST00000470247 CCDC78A2IDD5 438 aa11.26□□□□□ -0.61
SREBF1-209ENST00000470247 HEATR9A2RTY3 570 aa11.26□□□□□ -0.61
SREBF1-209ENST00000470247 SLC7A4O43246 635 aa11.26□□□□□ -0.61
SREBF1-209ENST00000470247 ALDH1A2O94788 518 aa11.26□□□□□ -0.61
SREBF1-209ENST00000470247 C1QAP02745 245 aa11.26□□□□□ -0.61
SREBF1-209ENST00000470247 LPOP22079 712 aaPredicted RBP11.26□□□□□ -0.61
SREBF1-209ENST00000470247 ACSL1P33121 698 aa11.26□□□□□ -0.61
SREBF1-209ENST00000470247 PXNP49023 591 aaPredicted RBP11.26□□□□□ -0.61
SREBF1-209ENST00000470247 CCR3P51677 355 aa11.26□□□□□ -0.61
SREBF1-209ENST00000470247 ARSDP51689 593 aa11.26□□□□□ -0.61
SREBF1-209ENST00000470247 ADPRHP54922 357 aa11.26□□□□□ -0.61
SREBF1-209ENST00000470247 DMWDQ09019 674 aa11.26□□□□□ -0.61
SREBF1-209ENST00000470247 BRD3Q15059 726 aa11.26□□□□□ -0.61
SREBF1-209ENST00000470247 KYNUQ16719 465 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms